Miyakogusa Predicted Gene

Lj0g3v0316929.2
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0316929.2 Non Chatacterized Hit- tr|I1K534|I1K534_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.50501
PE,51.02,0.042,seg,NULL,CUFF.21450.2
         (1004 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC59801                                                      252   4e-66
gnl|LJGI|TC71339                                                      117   1e-25

>gnl|LJGI|TC59801 
          Length = 1003

 Score =  252 bits (127), Expect = 4e-66
 Identities = 208/235 (88%)
 Strand = Plus / Plus

                                                                       
Query: 71  tcacagaggtaactcaaatccttctttcaatcaaagaaattcaattgtcttggctaggat 130
           |||||||||||| |||||||||||||||||||||||||  |||||||| |||||||||||
Sbjct: 548 tcacagaggtaattcaaatccttctttcaatcaaagaatctcaattgtattggctaggat 607

                                                                       
Query: 131 tatggaatttctcctttaattggaagaattatttgaacttgttgcttgagattgatggtt 190
           || ||||||| || |||  |||||||||| |||||||| | |||||||||||||||||| 
Sbjct: 608 taaggaatttttcttttggttggaagaatgatttgaacctattgcttgagattgatggtc 667

                                                                       
Query: 191 cttggatttgctcaccaagtgtttgtggaaaatactctgagatagtaaatctgcctaaga 250
            |||||||||| ||||||||||||||||||| |||||||||||||||||||| |||||||
Sbjct: 668 tttggatttgcacaccaagtgtttgtggaaattactctgagatagtaaatctccctaaga 727

                                                                  
Query: 251 aactttcttttgatcctggtggatccagaagttgtacacaagctgtttgtaaaaa 305
           ||||| | ||||||||||| ||||  ||   |||| |||||||||||||| ||||
Sbjct: 728 aacttccatttgatcctggaggatttagggattgttcacaagctgtttgtgaaaa 782


>gnl|LJGI|TC71339 
          Length = 1171

 Score =  117 bits (59), Expect = 1e-25
 Identities = 77/83 (92%)
 Strand = Plus / Plus

                                                                       
Query: 192 ttggatttgctcaccaagtgtttgtggaaaatactctgagatagtaaatctgcctaagaa 251
           |||||||||| ||||||||||||||||||| |||||||||||||||||||| ||||||||
Sbjct: 3   ttggatttgcacaccaagtgtttgtggaaattactctgagatagtaaatctccctaagaa 62

                                  
Query: 252 actttcttttgatcctggtggat 274
           |||| | ||||||||||| ||||
Sbjct: 63  acttccatttgatcctggaggat 85