Miyakogusa Predicted Gene
- Lj0g3v0316759.2
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0316759.2 Non Chatacterized Hit- tr|I1NCL9|I1NCL9_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.5088
PE=,81.88,0,Sina,Seven-in-absentia protein, TRAF-like domain;
ZF_RING_2,Zinc finger, RING-type; ZF_SIAH,Zinc fin,CUFF.21416.2
(942 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC66464 homologue to UniRef100_A8W461 Cluster: SINA2; n... 648 0.0
gnl|LJGI|AV778762 similar to UniRef100_A8W464 Cluster: SINA5; n=... 618 e-176
gnl|LJGI|TC69704 homologue to UniRef100_A8W464 Cluster: SINA5; n... 369 e-101
gnl|LJGI|TC68066 homologue to UniRef100_A8W463 Cluster: SINA4; n... 131 9e-30
gnl|LJGI|TC78090 homologue to UniRef100_A8W462 Cluster: SINA3; n... 60 3e-08
>gnl|LJGI|TC66464 homologue to UniRef100_A8W461 Cluster: SINA2; n=1; Medicago
truncatula|Rep: SINA2 - Medicago truncatula (Barrel
medic), partial (89%)
Length = 1460
Score = 648 bits (327), Expect = 0.0
Identities = 675/791 (85%)
Strand = Plus / Plus
Query: 25 catctgttttcttcagtcaccaagctacatggcaatggtcctactgctaccagtgtccac 84
|||| |||||||||| | ||||||||||| || ||||||| | | |||||||| ||
Sbjct: 420 catcagttttcttcaacctccaagctacataacattggtcctgccaccaccagtgttcat 479
Query: 85 gagattcttgaatgccctgtttgcaccaatgcaatgtaccctccaatccatcagtgccgc 144
|| ||||||||||||| |||||||| ||| | ||||||||||||||||||||||| | |
Sbjct: 480 gaccttcttgaatgccccgtttgcacaaattcgatgtaccctccaatccatcagtgtcac 539
Query: 145 aacgggcataccctttgttcgacatgtaagacaagggtacacaataggtgcccaacttgt 204
|| || || ||||||||||| ||||||||||||||||| ||||| | |||||||||||
Sbjct: 540 aatggacacaccctttgttcaacatgtaagacaagggtgcacaaccgatgcccaacttgc 599
Query: 205 agacaggaactgggtgatataaggtgtctggcgttggagaagatagcagaatcacttgaa 264
|| ||||| || |||||||| ||||||||||| |||||||||||||||| ||||| |||
Sbjct: 600 aggcaggagctcggtgatatcaggtgtctggcactggagaagatagcagagtcactggaa 659
Query: 265 ctgccttgcgaatacagatctcttgggtgtccagagatattcccctattacagaaaactc 324
||||||||| ||||| || |||||||||||||||||||| ||||| ||||| || |||
Sbjct: 660 ctgccttgcagatacatctcccttgggtgtccagagatatttccctactacagcaagctc 719
Query: 325 aaacatgagtctatttgtaacttcagaccgtacaattgcccttacactgggtcagactgc 384
||||| ||| || |||||||||||||||||||||| |||||||| | || |||||||||
Sbjct: 720 aaacacgaggctgtttgtaacttcagaccgtacaactgcccttatgccggatcagactgc 779
Query: 385 tctgttgttggggatattccacaccttgttgctcatttaagggacgaccaccgtgttgat 444
||||||||||| ||||||||| ||||||||| |||||||||||| |||||| | ||||||
Sbjct: 780 tctgttgttggtgatattccataccttgttggtcatttaagggatgaccacagggttgat 839
Query: 445 atgtattctgcatgcacttttaaccaccgctacgtcaaggctaatcccatggaagtagaa 504
||| |||||| ||||||||||||||| || || |||||| | ||||||||||||||||||
Sbjct: 840 atgcattctggatgcacttttaaccatcgttatgtcaagtccaatcccatggaagtagaa 899
Query: 505 aatgctacatggatgttaacagtcttccactgttatggtcactatttctgtctccatttt 564
||||||||||||||| |||| || ||||| || | |||||| ||||| || |||||||||
Sbjct: 900 aatgctacatggatgctaacggttttccattgctttggtcagtatttttgcctccatttt 959
Query: 565 gaagcctttcaactaggcacggctccggtttacatggcattcctccgtttcatgggagat 624
|||||||| || || || || ||||| ||||||||||||||||| || |||||||||||
Sbjct: 960 gaagccttccagctcggtacagctcctgtttacatggcattccttcggttcatgggagac 1019
Query: 625 gaaagagaagccaggagctacagctacagtcttgaggttggaggaagcgggcgtaaacta 684
|||||||| ||| ||| ||||||||| || | ||||||||||| | || ||||||||
Sbjct: 1020 gaaagagaggcccggaactacagctatagcttggaggttggaggcaatggacgtaaactt 1079
Query: 685 acatatgagggcagtccaagaagtattagagatagccacaagaaagttagagacagccat 744
|| | |||||| ||||||||||| |||||||||||||| |||||||| |||||||| |||
Sbjct: 1080 acttttgaggggagtccaagaagcattagagatagccataagaaagtgagagacagtcat 1139
Query: 745 gacggccttgttgtgcatcgtaacatggcaattttcttctcaggtggggatagtaaagag 804
|| ||||| | | | |||||||||||| ||||||||||||||||||| || ||||||
Sbjct: 1140 gatggcctcatcatataccgtaacatggcacttttcttctcaggtggggacaggaaagag 1199
Query: 805 ttgaagttacg 815
|||||||||||
Sbjct: 1200 ttgaagttacg 1210
>gnl|LJGI|AV778762 similar to UniRef100_A8W464 Cluster: SINA5; n=1; Medicago
truncatula|Rep: SINA5 - Medicago truncatula (Barrel
medic), partial (23%)
Length = 512
Score = 618 bits (312), Expect = e-176
Identities = 335/340 (98%), Gaps = 2/340 (0%)
Strand = Plus / Minus
Query: 605 tcctccgtttcatgggagatgaaagagaagccaggagctacagctacagtcttgaggttg 664
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 512 tcctccgtttcatgggagatgaaagagaagccaggagctacagctacagtcttgaggttg 453
Query: 665 gaggaagcgggcgtaaactaacatatgagggcagtccaagaagtattagagatagccaca 724
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 452 gaggaagcgggcgtaaactaacatatgagggcagtccaagaagtattagagatagccaca 393
Query: 725 agaaagttagagacagccatgacggccttgttgtgcatcgtaacatggca-attttcttc 783
|| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 392 agcaagttagagacagccatgacggccttgttgtgcatcgtaacatggcacattttcttc 333
Query: 784 tcaggtggggatagtaaagagttgaagttacgggaaagatatggaaacaacgaacccctg 843
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 332 tcaggtggggatagtaaagagttgaagttacgggaaagatatggaaacgacgaacccctg 273
Query: 844 tgggtggagtggacatacccaacatgtatagctagattttgcttgcatcttcccctccat 903
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 272 tgggtggagtggacatacccaacatgtatagctagattttgcttgcatcttcccctccat 213
Query: 904 gtaa-tttatttagagggtaatgttcttgcaagctgttga 942
|||| ||||||||||||||||||||||||| |||||||||
Sbjct: 212 gtaactttatttagagggtaatgttcttgctagctgttga 173
>gnl|LJGI|TC69704 homologue to UniRef100_A8W464 Cluster: SINA5; n=1; Medicago
truncatula|Rep: SINA5 - Medicago truncatula (Barrel
medic), partial (54%)
Length = 678
Score = 369 bits (186), Expect = e-101
Identities = 369/430 (85%)
Strand = Plus / Plus
Query: 386 ctgttgttggggatattccacaccttgttgctcatttaagggacgaccaccgtgttgata 445
|||||||||| ||||||||| ||||||||| |||||||||||| |||||| | |||||||
Sbjct: 1 ctgttgttggtgatattccataccttgttggtcatttaagggatgaccacagggttgata 60
Query: 446 tgtattctgcatgcacttttaaccaccgctacgtcaaggctaatcccatggaagtagaaa 505
|| |||||| ||||||||||||||| || || |||||| | |||||||||||||||||||
Sbjct: 61 tgcattctggatgcacttttaaccatcgttatgtcaagtccaatcccatggaagtagaaa 120
Query: 506 atgctacatggatgttaacagtcttccactgttatggtcactatttctgtctccattttg 565
|||||||||||||| |||| || ||||| || | |||||| ||||| || ||||||||||
Sbjct: 121 atgctacatggatgctaacggttttccattgctttggtcagtatttttgcctccattttg 180
Query: 566 aagcctttcaactaggcacggctccggtttacatggcattcctccgtttcatgggagatg 625
||||||| || || || || ||||| ||||||||||||||||| || ||||||||||| |
Sbjct: 181 aagccttccagctcggtacagctcctgtttacatggcattccttcggttcatgggagacg 240
Query: 626 aaagagaagccaggagctacagctacagtcttgaggttggaggaagcgggcgtaaactaa 685
||||||| ||| ||| ||||||||| || | ||||||||||| | || |||||||| |
Sbjct: 241 aaagagaggcccggaactacagctatagcttggaggttggaggcaatggacgtaaactta 300
Query: 686 catatgagggcagtccaagaagtattagagatagccacaagaaagttagagacagccatg 745
| | |||||| ||||||||||| |||||||||||||| |||||||| |||||||| ||||
Sbjct: 301 cttttgaggggagtccaagaagcattagagatagccataagaaagtgagagacagtcatg 360
Query: 746 acggccttgttgtgcatcgtaacatggcaattttcttctcaggtggggatagtaaagagt 805
| ||||| | | | |||||||||||| ||||||||||||||||||| || |||||||
Sbjct: 361 atggcctcatcatataccgtaacatggcacttttcttctcaggtggggacaggaaagagt 420
Query: 806 tgaagttacg 815
||||||||||
Sbjct: 421 tgaagttacg 430
>gnl|LJGI|TC68066 homologue to UniRef100_A8W463 Cluster: SINA4; n=1; Medicago
truncatula|Rep: SINA4 - Medicago truncatula (Barrel
medic), complete
Length = 1635
Score = 131 bits (66), Expect = 9e-30
Identities = 432/554 (77%)
Strand = Plus / Plus
Query: 73 accagtgtccacgagattcttgaatgccctgtttgcaccaatgcaatgtaccctccaatc 132
||||| ||||||||| | || ||||||||||| || |||||| |||||||||| |||||
Sbjct: 499 accagcgtccacgagttgctggaatgccctgtatgtaccaattcaatgtacccaccaatt 558
Query: 133 catcagtgccgcaacgggcataccctttgttcgacatgtaagacaagggtacacaatagg 192
|||||||||| ||| || || || | |||||||| ||||| |||||||| ||||| |
Sbjct: 559 catcagtgccacaatggccacacattgtgttcgacgtgtaaaacaagggtgcacaaccga 618
Query: 193 tgcccaacttgtagacaggaactgggtgatataaggtgtctggcgttggagaagatagca 252
|| || ||||||||||| || || || ||||| |||||||| || |||||||| | ||
Sbjct: 619 tgtcccacttgtagacaagagcttggggatattaggtgtctagcactggagaaggtggct 678
Query: 253 gaatcacttgaactgccttgcgaatacagatctcttgggtgtccagagatattcccctat 312
||||||||||| | |||||| | ||| || ||||| |||||||| || || || ||
Sbjct: 679 gaatcacttgagttaccttgcaagtactactcccttggatgtccagaaatctttccatac 738
Query: 313 tacagaaaactcaaacatgagtctatttgtaacttcagaccgtacaattgcccttacact 372
||||| || || || |||||| | || || || |||||||| || | ||| ||||| |
Sbjct: 739 tacagcaagcttaagcatgagacaatatgcaatttcagaccatatagttgtccttatgcg 798
Query: 373 gggtcagactgctctgttgttggggatattccacaccttgttgctcatttaagggacgac 432
|| || || || |||||||| ||||||||||| ||| |||||||| || ||||| |||
Sbjct: 799 ggatccgagtgttctgttgtcggggatattcccttcctcgttgctcacttgagggatgac 858
Query: 433 caccgtgttgatatgtattctgcatgcacttttaaccaccgctacgtcaaggctaatccc 492
|| || || ||| | | | |||||| || ||||| || || || ||| | ||||||
Sbjct: 859 cataaggtggacatgcacacgggatgcacgttcaaccatcgttatgtgaagtcaaatccc 918
Query: 493 atggaagtagaaaatgctacatggatgttaacagtcttccactgttatggtcactatttc 552
|||||||| ||||| || |||||| | ||||| || || |||| ||| || ||||||
Sbjct: 919 cgtgaagtagagaatgcaacctggatgctcacagtatttcattgttttggccaatatttc 978
Query: 553 tgtctccattttgaagcctttcaactaggcacggctccggtttacatggcattcctccgt 612
|| || ||||||||||| || || || |||| ||| || ||||||||||||||||| |||
Sbjct: 979 tgcctgcattttgaagctttccagcttggcatggcccccgtttacatggcattccttcgt 1038
Query: 613 ttcatgggagatga 626
|||||||| |||||
Sbjct: 1039 ttcatgggcgatga 1052
>gnl|LJGI|TC78090 homologue to UniRef100_A8W462 Cluster: SINA3; n=1; Medicago
truncatula|Rep: SINA3 - Medicago truncatula (Barrel
medic), partial (38%)
Length = 555
Score = 60.0 bits (30), Expect = 3e-08
Identities = 99/122 (81%)
Strand = Plus / Plus
Query: 547 tatttctgtctccattttgaagcctttcaactaggcacggctccggtttacatggcattc 606
||||||||||| ||||||||||| ||||||||||| | |||||| || ||||| || ||
Sbjct: 53 tatttctgtctgcattttgaagcttttcaactaggaatggctcctgtctacatcgcgttt 112
Query: 607 ctccgtttcatgggagatgaaagagaagccaggagctacagctacagtcttgaggttgga 666
| || |||||||| ||||| | || || | || ||||| ||||||||| ||||| |||
Sbjct: 113 ttgcggttcatgggggatgataatgaggcaaagaactacacctacagtctcgaggtggga 172
Query: 667 gg 668
||
Sbjct: 173 gg 174