Miyakogusa Predicted Gene
- Lj0g3v0316469.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0316469.1 tr|I3SLV8|I3SLV8_LOTJA ATP synthase gamma chain
OS=Lotus japonicus PE=2 SV=1,98.47,0,seg,NULL; no description,NULL;
ATP-synt,ATPase, F1 complex, gamma subunit; ATPASEGAMMA,ATPase, F1
co,CUFF.21467.1
(789 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC57922 similar to UniRef100_A7PDA7 Cluster: Chromosome... 1564 0.0
gnl|LJGI|BP032615 similar to UniRef100_Q6UA03 Cluster: Fiber pro... 315 2e-85
gnl|LJGI|BP060941 268 5e-71
gnl|LJGI|TC75088 homologue to UniRef100_Q6UA03 Cluster: Fiber pr... 100 3e-20
gnl|LJGI|GO010349 similar to UniRef100_A7PDA7 Cluster: Chromosom... 74 1e-12
gnl|LJGI|TC78834 similar to UniRef100_A7PDA7 Cluster: Chromosome... 74 1e-12
gnl|LJGI|TC77332 similar to UniRef100_A7PDA7 Cluster: Chromosome... 62 6e-09
gnl|LJGI|TC81620 similar to UniRef100_A9DH77 Cluster: Aspartic p... 54 1e-06
gnl|LJGI|TC67330 54 1e-06
>gnl|LJGI|TC57922 similar to UniRef100_A7PDA7 Cluster: Chromosome chr17 scaffold_12,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr17 scaffold_12, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (92%)
Length = 1389
Score = 1564 bits (789), Expect = 0.0
Identities = 789/789 (100%)
Strand = Plus / Plus
Query: 1 atggcgatggctgctgctcttcgacgcgaggggaagcgtttggctcctctcatctctccc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 157 atggcgatggctgctgctcttcgacgcgaggggaagcgtttggctcctctcatctctccc 216
Query: 61 ctaccaatccgatcctctcccatttctccagaccaaaccctcaatggattccgctccatt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 217 ctaccaatccgatcctctcccatttctccagaccaaaccctcaatggattccgctccatt 276
Query: 121 tcaactcaaattgttcgaaaccggatgaagagtgtcaagaatatccagaaaatcaccaag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 277 tcaactcaaattgttcgaaaccggatgaagagtgtcaagaatatccagaaaatcaccaag 336
Query: 181 gccatgaagatggttgccgcgtctaagctacgcgctgttcaaaccagagctgaaaattca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 337 gccatgaagatggttgccgcgtctaagctacgcgctgttcaaaccagagctgaaaattca 396
Query: 241 cgtgggttgtggcagcccttcacggcccttctgggtgatgctacaagtgttgacgtcaag 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 397 cgtgggttgtggcagcccttcacggcccttctgggtgatgctacaagtgttgacgtcaag 456
Query: 301 aagaacgtcattgttaccgtttcatctgacaaaggtctttgcggtggaatcaattccaca 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 457 aagaacgtcattgttaccgtttcatctgacaaaggtctttgcggtggaatcaattccaca 516
Query: 361 tccgtgaagataagcagggctttaagcaaattgaatgcggggcctgataaagagacaaag 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 517 tccgtgaagataagcagggctttaagcaaattgaatgcggggcctgataaagagacaaag 576
Query: 421 tatgtcatattgggcgagaaagctaaagctcagctgattcgtgactccaagcaagacatt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 577 tatgtcatattgggcgagaaagctaaagctcagctgattcgtgactccaagcaagacatt 636
Query: 481 ctgctctcattaactgagttgcagaaaaatcctctgaattacactcaggtgtcagtcttg 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 637 ctgctctcattaactgagttgcagaaaaatcctctgaattacactcaggtgtcagtcttg 696
Query: 541 gcagatgacattctaaagaatgttgagttcgatgcattgaggatcgtgttcaacaaattt 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 697 gcagatgacattctaaagaatgttgagttcgatgcattgaggatcgtgttcaacaaattt 756
Query: 601 cattcagttgtacagttttatccaactgtgtcaactgtactatctcctgagattgtcgag 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 757 cattcagttgtacagttttatccaactgtgtcaactgtactatctcctgagattgtcgag 816
Query: 661 agagagactgaatctggaggaatgcttggggaattggattcatatgagattgaaggtggt 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 817 agagagactgaatctggaggaatgcttggggaattggattcatatgagattgaaggtggt 876
Query: 721 gattcaaaatcagaaattcttcagaatctgtctgagttccagttttcttgtgtcatgttc 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 877 gattcaaaatcagaaattcttcagaatctgtctgagttccagttttcttgtgtcatgttc 936
Query: 781 aatgcggtg 789
|||||||||
Sbjct: 937 aatgcggtg 945
>gnl|LJGI|BP032615 similar to UniRef100_Q6UA03 Cluster: Fiber protein Fb33; n=1;
Gossypium barbadense|Rep: Fiber protein Fb33 - Gossypium
barbadense (Sea-island cotton) (Egyptian cotton),
partial (19%)
Length = 248
Score = 315 bits (159), Expect = 2e-85
Identities = 182/186 (97%), Gaps = 4/186 (2%)
Strand = Plus / Minus
Query: 562 gttgagttcgatgcattgaggatcgtgttcaacaaatttcattcagttgtacagttttat 621
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 248 gttgagttcgatgcattgaggatcgtgttcaacaaatttcattcagttgtacagttttat 189
Query: 622 ccaactgtgtcaactgtactatctcctgagattgtcgagagagagactgaatctggagga 681
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 188 ccaactgtgtcaactgtactatctcctgagattgtcgagagagagactgaatctggagga 129
Query: 682 atgcttggggaattggattcatatgagattgaaggtg--gtgatt-caaaatca-gaaat 737
||||||||||||||||||||||||||||||||||||| |||||| |||||||| |||||
Sbjct: 128 atgcttggggaattggattcatatgagattgaaggtgnngtgattccaaaatcacgaaat 69
Query: 738 tcttca 743
||||||
Sbjct: 68 tcttca 63
>gnl|LJGI|BP060941
Length = 531
Score = 268 bits (135), Expect = 5e-71
Identities = 194/207 (93%), Gaps = 5/207 (2%)
Strand = Plus / Plus
Query: 1 atggcgatggctgctgctcttcga-cgcgaggggaagcgtttggctcctctcatctctcc 59
||||||||||| |||||||| ||| ||||||||||||||| ||||||||||||| |||||
Sbjct: 45 atggcgatggcggctgctctgcgagcgcgaggggaagcgtatggctcctctcatgtctcc 104
Query: 60 cctaccaatccgatcctctcccatttctccagaccaaaccctcaatggattccgctccat 119
||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||
Sbjct: 105 cctaccaatccgatcctctcccattgctccagacgaaaccctcaatggattccgctccat 164
Query: 120 ttcaactcaa-attgttcgaaacc-ggatgaagagtgtcaagaatatccagaaaatcacc 177
|||||||||| | ||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 165 ttcaactcaagagtgttcgaaaccgggatgaagagtgtcaagaatatccagaaaatcacc 224
Query: 178 aa-ggccatgaa-gatggttgccgcgt 202
|| ||||| ||| ||||||||||||||
Sbjct: 225 aagggccacgaaggatggttgccgcgt 251
>gnl|LJGI|TC75088 homologue to UniRef100_Q6UA03 Cluster: Fiber protein Fb33; n=1;
Gossypium barbadense|Rep: Fiber protein Fb33 - Gossypium
barbadense (Sea-island cotton) (Egyptian cotton),
partial (25%)
Length = 541
Score = 99.6 bits (50), Expect = 3e-20
Identities = 53/54 (98%)
Strand = Plus / Plus
Query: 736 attcttcagaatctgtctgagttccagttttcttgtgtcatgttcaatgcggtg 789
|||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 1 attcttcagaatctgtctgagttccagttttcttgtgtcatgttcaatccggtg 54
>gnl|LJGI|GO010349 similar to UniRef100_A7PDA7 Cluster: Chromosome chr17 scaffold_12,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr17 scaffold_12, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (9%)
Length = 402
Score = 73.8 bits (37), Expect = 1e-12
Identities = 81/93 (87%), Gaps = 2/93 (2%)
Strand = Plus / Plus
Query: 105 tggattccgctccatttcaactcaaattgttcgaaaccggatgaagagtgtcaagaatat 164
|||||||||||| |||| |||| || |||| ||||||||||||||||| ||||||||
Sbjct: 160 tggattccgctctatttgaactaaagaggttcataaccggatgaagagtgtgaagaatat 219
Query: 165 ccagaaaatcaccaaggccatgaagatggttgc 197
||| ||||||||||||| ||||||||||||||
Sbjct: 220 cca-aaaatcaccaagg-aatgaagatggttgc 250
Score = 54.0 bits (27), Expect = 1e-06
Identities = 39/43 (90%)
Strand = Plus / Plus
Query: 139 aaccggatgaagagtgtcaagaatatccagaaaatcaccaagg 181
||||||||||||||||| ||||||||||| |||| ||| ||||
Sbjct: 272 aaccggatgaagagtgtgaagaatatccaaaaaaacacgaagg 314
>gnl|LJGI|TC78834 similar to UniRef100_A7PDA7 Cluster: Chromosome chr17 scaffold_12,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr17 scaffold_12, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (8%)
Length = 680
Score = 73.8 bits (37), Expect = 1e-12
Identities = 81/93 (87%), Gaps = 2/93 (2%)
Strand = Plus / Plus
Query: 105 tggattccgctccatttcaactcaaattgttcgaaaccggatgaagagtgtcaagaatat 164
|||||||||||| |||| |||| || |||| ||||||||||||||||| ||||||||
Sbjct: 70 tggattccgctctatttgaactaaagaggttcataaccggatgaagagtgtgaagaatat 129
Query: 165 ccagaaaatcaccaaggccatgaagatggttgc 197
||| ||||||||||||| ||||||||||||||
Sbjct: 130 cca-aaaatcaccaagg-aatgaagatggttgc 160
Score = 52.0 bits (26), Expect = 5e-06
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 139 aaccggatgaagagtgtcaagaatatccagaaaa 172
||||||||||||||||| ||||||||||| ||||
Sbjct: 182 aaccggatgaagagtgtgaagaatatccaaaaaa 215
>gnl|LJGI|TC77332 similar to UniRef100_A7PDA7 Cluster: Chromosome chr17 scaffold_12,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr17 scaffold_12, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (11%)
Length = 674
Score = 61.9 bits (31), Expect = 6e-09
Identities = 54/59 (91%), Gaps = 2/59 (3%)
Strand = Plus / Plus
Query: 139 aaccggatgaagagtgtcaagaatatccagaaaatcaccaaggccatgaagatggttgc 197
||||||||||||||||| |||||||||| ||||||||||||| ||||||||||||||
Sbjct: 272 aaccggatgaagagtgtgaagaatatcc-caaaatcaccaagg-aatgaagatggttgc 328
Score = 52.0 bits (26), Expect = 5e-06
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 139 aaccggatgaagagtgtcaagaatatccagaaaa 172
||||||||||||||||| ||||||||||| ||||
Sbjct: 350 aaccggatgaagagtgtgaagaatatccaaaaaa 383
>gnl|LJGI|TC81620 similar to UniRef100_A9DH77 Cluster: Aspartic protease; n=3;
Medicago|Rep: Aspartic protease - Medicago truncatula
var. truncatula, partial (21%)
Length = 860
Score = 54.0 bits (27), Expect = 1e-06
Identities = 39/43 (90%)
Strand = Plus / Plus
Query: 139 aaccggatgaagagtgtcaagaatatccagaaaatcaccaagg 181
|||| |||||||||||| ||| ||||||| |||||||||||||
Sbjct: 223 aaccagatgaagagtgtgaaggatatccaaaaaatcaccaagg 265
>gnl|LJGI|TC67330
Length = 600
Score = 54.0 bits (27), Expect = 1e-06
Identities = 45/51 (88%)
Strand = Plus / Plus
Query: 105 tggattccgctccatttcaactcaaattgttcgaaaccggatgaagagtgt 155
|||||||||||| |||||||||||| | |||| |||| ||||||||||||
Sbjct: 418 tggattccgctctatttcaactcaagtggttcataaccagatgaagagtgt 468