Miyakogusa Predicted Gene

Lj0g3v0316399.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0316399.1 tr|I0Z940|I0Z940_9CHLO Methionine--tRNA ligase
OS=Coccomyxa subellipsoidea C-169 GN=metG PE=3
SV=1,48.48,1e-18,Anticodon-binding domain of a subclass of class I
aminoacyl-tRNA synthetases,Aminoacyl-tRNA syntheta,CUFF.21383.1
         (352 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC80990 similar to UniRef100_A7PIX8 Cluster: Chromosome...   509   e-144

>gnl|LJGI|TC80990 similar to UniRef100_A7PIX8 Cluster: Chromosome chr13 scaffold_17,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr13 scaffold_17, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (62%)
          Length = 1044

 Score =  509 bits (257), Expect = e-144
 Identities = 320/341 (93%)
 Strand = Plus / Plus

                                                                       
Query: 1   atggaaattggtaatattggcaattcctatatggatgagcgtgcaccatggtctcccttt 60
           ||||| ||||||||| ||||||||||||| |||||||| || ||||||||||||| ||||
Sbjct: 366 atggagattggtaatgttggcaattcctacatggatgaacgcgcaccatggtctctcttt 425

                                                                       
Query: 61  aagcaagggggtgctgcctctgaagcagctgccaaggacattgtgattatattagagaca 120
           |||||||||||||||||||||||||||||||| |||||| |||| |||||||||||||| 
Sbjct: 426 aagcaagggggtgctgcctctgaagcagctgctaaggaccttgttattatattagagacc 485

                                                                       
Query: 121 gtgaggattatcgcagttgcactatttcctgtttccccgagcttgagttggagaatatat 180
           ||||||||||||||| ||||||||||||| ||| ||||||||||||||||||||||||||
Sbjct: 486 gtgaggattatcgcaattgcactatttcccgttaccccgagcttgagttggagaatatat 545

                                                                       
Query: 181 gcacagcttggctattctagggaccaatttgatgcagcaacctggagtgacaccagatgg 240
           ||||||||||||||||| |||||||||||||||||||||||||||||||||||||  |||
Sbjct: 546 gcacagcttggctattccagggaccaatttgatgcagcaacctggagtgacaccacgtgg 605

                                                                       
Query: 241 ggtggtcttaagggtggccaggtcatggcccaacctaaaccagtgtttgctaggattgaa 300
           ||||||||||||||||||||||||||||| || ||||||||| | |||||||||||||||
Sbjct: 606 ggtggtcttaagggtggccaggtcatggctcagcctaaaccaatttttgctaggattgaa 665

                                                    
Query: 301 aaccaaactgaagtggaagacaaaagggttgcagtggggaa 341
           |||||||||||||||||||||||| ||||||||||||||||
Sbjct: 666 aaccaaactgaagtggaagacaaaggggttgcagtggggaa 706