Miyakogusa Predicted Gene
- Lj0g3v0316319.2
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0316319.2 CUFF.21377.2
(669 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC69135 similar to UniRef100_A7NZB1 Cluster: Chromosome... 1225 0.0
gnl|LJGI|TC70084 similar to UniRef100_A7NZB1 Cluster: Chromosome... 466 e-131
gnl|LJGI|AV423294 similar to UniRef100_Q9MAY6 Cluster: Protein k... 347 5e-95
gnl|LJGI|TC75263 homologue to UniRef100_A7NW73 Cluster: Chromoso... 86 3e-16
gnl|LJGI|TC76672 homologue to UniRef100_A7Q9T6 Cluster: Chromoso... 60 2e-08
gnl|LJGI|TC57526 similar to UniRef100_A7NYZ7 Cluster: Chromosome... 56 3e-07
>gnl|LJGI|TC69135 similar to UniRef100_A7NZB1 Cluster: Chromosome chr6 scaffold_3,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr6 scaffold_3, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (39%)
Length = 858
Score = 1225 bits (618), Expect = 0.0
Identities = 621/622 (99%)
Strand = Plus / Plus
Query: 48 taaaatgaagcctccggtcatatatcgtgacatcaaatgctccaaccttttgataggtga 107
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2 taaaatgaagcctccggtcatatatcgtgacatcaaatgctccaaccttttgataggtga 61
Query: 108 tgggtaccatcccaagttatctgattttggcctggcaaaagttggtccaattggtgataa 167
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 62 tgggtaccatcccaagttatctgattttggcctggcaaaagttggtccaattggtgataa 121
Query: 168 gactcatgtttccactagagtaatgggtacttatgggtactgtgccccggattatgcaat 227
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122 gactcatgtttccactagagtaatgggtacttatgggtactgtgccccggattatgcaat 181
Query: 228 gacgggtcaattgacattcaagtctgatgtatatagcttcggggttgttcttttggagat 287
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 182 gacgggtcaattgacattcaagtctgatgtatatagcttcggggttgttcttttggagat 241
Query: 288 catcacaggcaggaaggccatagaccatacaaaacctgccaaagaacaaaatatagttgc 347
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 242 catcacaggcaggaaggccatagaccatacaaaacctgccaaagaacaaaatctagttgc 301
Query: 348 atgggcaagacccttattccgagaccggaaaaaattctccctgatggtagatccattgct 407
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 302 atgggcaagacccttattccgagaccggaaaaaattctccctgatggtagatccattgct 361
Query: 408 tgaaggtcaatatccagtgagaggtttgtaccaagctcttgctattgctgctatgtgtgt 467
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 362 tgaaggtcaatatccagtgagaggtttgtaccaagctcttgctattgctgctatgtgtgt 421
Query: 468 tcaagagcagcctaacatgcgtcctgttatagttgatgtggttaccgctctgaactacct 527
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 422 tcaagagcagcctaacatgcgtcctgttatagttgatgtggttaccgctctgaactacct 481
Query: 528 tgctaccaacaaatatgaccctcaaaatcagacagtagaaagctctaatagaagaaacac 587
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 482 tgctaccaacaaatatgaccctcaaaatcagacagtagaaagctctaatagaagaaacac 541
Query: 588 atcttctccaatgggtaaaggtgatgatcatagacgtaatgatagtaatgattctggaac 647
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 542 atcttctccaatgggtaaaggtgatgatcatagacgtaatgatagtaatgattctggaac 601
Query: 648 agacatatccggagattagaaa 669
||||||||||||||||||||||
Sbjct: 602 agacatatccggagattagaaa 623
>gnl|LJGI|TC70084 similar to UniRef100_A7NZB1 Cluster: Chromosome chr6 scaffold_3,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr6 scaffold_3, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (44%)
Length = 890
Score = 466 bits (235), Expect = e-131
Identities = 454/527 (86%)
Strand = Plus / Plus
Query: 19 gcagctagaggtttggagtacttacataataaaatgaagcctccggtcatatatcgtgac 78
|||||| ||||||||||||| | ||| |||||||||||||||| |||||||| |||||
Sbjct: 47 gcagctcgaggtttggagtatctgcatgataaaatgaagcctcctgtcatataccgtgat 106
Query: 79 atcaaatgctccaaccttttgataggtgatgggtaccatcccaagttatctgattttggc 138
| || ||||| ||| ||||| ||||||| || || ||| ||||||||||||||||||||
Sbjct: 107 ctgaagtgctctaacattttgttaggtgagggatatcatgccaagttatctgattttggc 166
Query: 139 ctggcaaaagttggtccaattggtgataagactcatgtttccactagagtaatgggtact 198
|||||||||| || ||||||||||||||||| |||||||| ||||| || ||||| ||
Sbjct: 167 ttggcaaaagtaggcccaattggtgataagacccatgtttcaactagggttatgggcaca 226
Query: 199 tatgggtactgtgccccggattatgcaatgacgggtcaattgacattcaagtctgatgta 258
||||||||||||||||||||||||||||||||||| || |||||||||||||| ||| |
Sbjct: 227 tatgggtactgtgccccggattatgcaatgacgggccagttgacattcaagtcagatatt 286
Query: 259 tatagcttcggggttgttcttttggagatcatcacaggcaggaaggccatagaccataca 318
|| |||| |||||||||||||||||| |||||||||||||||| || || |||||||||
Sbjct: 287 tacggctttggggttgttcttttggagctcatcacaggcaggaaagctattgaccataca 346
Query: 319 aaacctgccaaagaacaaaatatagttgcatgggcaagacccttattccgagaccggaaa 378
||||||||||||||||| ||| | ||||||||||||| |||||| ||| |||| || ||
Sbjct: 347 aaacctgccaaagaacagaatctggttgcatgggcaaaacccttgttcagagataggcaa 406
Query: 379 aaattctccctgatggtagatccattgcttgaaggtcaatatccagtgagaggtttgtac 438
|||||||| | ||||| || ||||||||| ||||||||||||| |||||| || |||
Sbjct: 407 aaattctcgcaaatggttgacccattgcttcaaggtcaatatccgaagagaggcttatac 466
Query: 439 caagctcttgctattgctgctatgtgtgttcaagagcagcctaacatgcgtcctgttata 498
|||||||||||||| || || |||||||||||||||||||||| ||||| |||||| ||
Sbjct: 467 caagctcttgctatcgcagcaatgtgtgttcaagagcagcctagtatgcggcctgttgta 526
Query: 499 gttgatgtggttaccgctctgaactaccttgctaccaacaaatatga 545
| |||||||||||| || || || ||||||||| ||||||| |||||
Sbjct: 527 gctgatgtggttacagcgctaaattaccttgcttccaacaagtatga 573
>gnl|LJGI|AV423294 similar to UniRef100_Q9MAY6 Cluster: Protein kinase 1; n=1; Populus
nigra|Rep: Protein kinase 1 - Populus nigra (Lombardy
poplar), partial (34%)
Length = 428
Score = 347 bits (175), Expect = 5e-95
Identities = 175/175 (100%)
Strand = Plus / Plus
Query: 1 atgaaaatagctgctggtgcagctagaggtttggagtacttacataataaaatgaagcct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 254 atgaaaatagctgctggtgcagctagaggtttggagtacttacataataaaatgaagcct 313
Query: 61 ccggtcatatatcgtgacatcaaatgctccaaccttttgataggtgatgggtaccatccc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 314 ccggtcatatatcgtgacatcaaatgctccaaccttttgataggtgatgggtaccatccc 373
Query: 121 aagttatctgattttggcctggcaaaagttggtccaattggtgataagactcatg 175
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 374 aagttatctgattttggcctggcaaaagttggtccaattggtgataagactcatg 428
>gnl|LJGI|TC75263 homologue to UniRef100_A7NW73 Cluster: Chromosome chr5 scaffold_2,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr5 scaffold_2, whole genome shotgun sequence
- Vitis vinifera (Grape), partial (67%)
Length = 1203
Score = 85.7 bits (43), Expect = 3e-16
Identities = 103/123 (83%)
Strand = Plus / Plus
Query: 115 catcccaagttatctgattttggcctggcaaaagttggtccaattggtgataagactcat 174
||||||||| |||| |||||||| ||||||||| |||| ||| |||| || |||||||||
Sbjct: 959 catcccaagctatcagattttgggctggcaaaacttgggccagttggcgacaagactcat 1018
Query: 175 gtttccactagagtaatgggtacttatgggtactgtgccccggattatgcaatgacgggt 234
|| || || |||||||||| || ||||| || |||||||| || ||||| ||||| |||
Sbjct: 1019 gtatctacacgagtaatgggaacatatggctattgtgccccagaatatgctatgactggt 1078
Query: 235 caa 237
|||
Sbjct: 1079 caa 1081
>gnl|LJGI|TC76672 homologue to UniRef100_A7Q9T6 Cluster: Chromosome chr8 scaffold_68,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr8 scaffold_68, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (38%)
Length = 729
Score = 60.0 bits (30), Expect = 2e-08
Identities = 33/34 (97%)
Strand = Plus / Plus
Query: 252 tgatgtatatagcttcggggttgttcttttggag 285
||||||||||||||| ||||||||||||||||||
Sbjct: 72 tgatgtatatagctttggggttgttcttttggag 105
>gnl|LJGI|TC57526 similar to UniRef100_A7NYZ7 Cluster: Chromosome chr6 scaffold_3,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr6 scaffold_3, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (74%)
Length = 1578
Score = 56.0 bits (28), Expect = 3e-07
Identities = 58/68 (85%)
Strand = Plus / Plus
Query: 127 tctgattttggcctggcaaaagttggtccaattggtgataagactcatgtttccactaga 186
||||||||||| ||||| | || ||| |||| ||||||||||| |||||||| ||||||
Sbjct: 667 tctgattttgggctggccagagatgggccaactggtgataagagccatgtttctactaga 726
Query: 187 gtaatggg 194
|| |||||
Sbjct: 727 gtcatggg 734