Miyakogusa Predicted Gene
- Lj0g3v0316319.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0316319.1 CUFF.21377.1
(897 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|AV423294 similar to UniRef100_Q9MAY6 Cluster: Protein k... 848 0.0
gnl|LJGI|TC69135 similar to UniRef100_A7NZB1 Cluster: Chromosome... 517 e-146
gnl|LJGI|TC70084 similar to UniRef100_A7NZB1 Cluster: Chromosome... 307 6e-83
gnl|LJGI|GO032966 similar to UniRef100_Q9MAY6 Cluster: Protein k... 113 2e-24
gnl|LJGI|TC75263 homologue to UniRef100_A7NW73 Cluster: Chromoso... 86 4e-16
gnl|LJGI|TC80105 similar to UniRef100_Q9MAY5 Cluster: Protein ki... 68 1e-10
gnl|LJGI|TC76672 homologue to UniRef100_A7Q9T6 Cluster: Chromoso... 60 2e-08
gnl|LJGI|TC57526 similar to UniRef100_A7NYZ7 Cluster: Chromosome... 56 4e-07
gnl|LJGI|TC76548 similar to UniRef100_A7PST8 Cluster: Chromosome... 54 2e-06
>gnl|LJGI|AV423294 similar to UniRef100_Q9MAY6 Cluster: Protein kinase 1; n=1; Populus
nigra|Rep: Protein kinase 1 - Populus nigra (Lombardy
poplar), partial (34%)
Length = 428
Score = 848 bits (428), Expect = 0.0
Identities = 428/428 (100%)
Strand = Plus / Plus
Query: 327 tttcattgagagaataaatcaggttgtagcaataaagcaactcaaccctcatgggcttca 386
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tttcattgagagaataaatcaggttgtagcaataaagcaactcaaccctcatgggcttca 60
Query: 387 aggaattagggaatttgttgttgaagtgttgacacttagtttggcagaccacccaaatct 446
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 aggaattagggaatttgttgttgaagtgttgacacttagtttggcagaccacccaaatct 120
Query: 447 tgtgaagttaattgggttttgtgcagagggagagcaaaggctattggtttatgagtacat 506
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 tgtgaagttaattgggttttgtgcagagggagagcaaaggctattggtttatgagtacat 180
Query: 507 gccattaggatccttggagagccatttgcatgatattttgcccgggaaaaaaccacttga 566
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 gccattaggatccttggagagccatttgcatgatattttgcccgggaaaaaaccacttga 240
Query: 567 ttggaatacaagaatgaaaatagctgctggtgcagctagaggtttggagtacttacataa 626
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 ttggaatacaagaatgaaaatagctgctggtgcagctagaggtttggagtacttacataa 300
Query: 627 taaaatgaagcctccggtcatatatcgtgacatcaaatgctccaaccttttgataggtga 686
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 taaaatgaagcctccggtcatatatcgtgacatcaaatgctccaaccttttgataggtga 360
Query: 687 tgggtaccatcccaagttatctgattttggcctggcaaaagttggtccaattggtgataa 746
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 tgggtaccatcccaagttatctgattttggcctggcaaaagttggtccaattggtgataa 420
Query: 747 gactcatg 754
||||||||
Sbjct: 421 gactcatg 428
>gnl|LJGI|TC69135 similar to UniRef100_A7NZB1 Cluster: Chromosome chr6 scaffold_3,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr6 scaffold_3, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (39%)
Length = 858
Score = 517 bits (261), Expect = e-146
Identities = 261/261 (100%)
Strand = Plus / Plus
Query: 627 taaaatgaagcctccggtcatatatcgtgacatcaaatgctccaaccttttgataggtga 686
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2 taaaatgaagcctccggtcatatatcgtgacatcaaatgctccaaccttttgataggtga 61
Query: 687 tgggtaccatcccaagttatctgattttggcctggcaaaagttggtccaattggtgataa 746
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 62 tgggtaccatcccaagttatctgattttggcctggcaaaagttggtccaattggtgataa 121
Query: 747 gactcatgtttccactagagtaatgggtacttatgggtactgtgccccggattatgcaat 806
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122 gactcatgtttccactagagtaatgggtacttatgggtactgtgccccggattatgcaat 181
Query: 807 gacgggtcaattgacattcaagtctgatgtatatagcttcggggttgttcttttggagat 866
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 182 gacgggtcaattgacattcaagtctgatgtatatagcttcggggttgttcttttggagat 241
Query: 867 catcacaggcaggaaggccat 887
|||||||||||||||||||||
Sbjct: 242 catcacaggcaggaaggccat 262
>gnl|LJGI|TC70084 similar to UniRef100_A7NZB1 Cluster: Chromosome chr6 scaffold_3,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr6 scaffold_3, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (44%)
Length = 890
Score = 307 bits (155), Expect = 6e-83
Identities = 284/327 (86%)
Strand = Plus / Plus
Query: 555 aaaaccacttgattggaatacaagaatgaaaatagctgctggtgcagctagaggtttgga 614
||||||||||||||||||||| |||||| |||||| | || |||||| ||||||||||
Sbjct: 4 aaaaccacttgattggaataccagaatgcgaatagcaaccggcgcagctcgaggtttgga 63
Query: 615 gtacttacataataaaatgaagcctccggtcatatatcgtgacatcaaatgctccaacct 674
||| | ||| |||||||||||||||| |||||||| ||||| | || ||||| ||| |
Sbjct: 64 gtatctgcatgataaaatgaagcctcctgtcatataccgtgatctgaagtgctctaacat 123
Query: 675 tttgataggtgatgggtaccatcccaagttatctgattttggcctggcaaaagttggtcc 734
|||| ||||||| || || ||| |||||||||||||||||||| |||||||||| || ||
Sbjct: 124 tttgttaggtgagggatatcatgccaagttatctgattttggcttggcaaaagtaggccc 183
Query: 735 aattggtgataagactcatgtttccactagagtaatgggtacttatgggtactgtgcccc 794
||||||||||||||| |||||||| ||||| || ||||| || |||||||||||||||||
Sbjct: 184 aattggtgataagacccatgtttcaactagggttatgggcacatatgggtactgtgcccc 243
Query: 795 ggattatgcaatgacgggtcaattgacattcaagtctgatgtatatagcttcggggttgt 854
|||||||||||||||||| || |||||||||||||| ||| | || |||| ||||||||
Sbjct: 244 ggattatgcaatgacgggccagttgacattcaagtcagatatttacggctttggggttgt 303
Query: 855 tcttttggagatcatcacaggcaggaa 881
|||||||||| ||||||||||||||||
Sbjct: 304 tcttttggagctcatcacaggcaggaa 330
>gnl|LJGI|GO032966 similar to UniRef100_Q9MAY6 Cluster: Protein kinase 1; n=1; Populus
nigra|Rep: Protein kinase 1 - Populus nigra (Lombardy
poplar), partial (12%)
Length = 161
Score = 113 bits (57), Expect = 2e-24
Identities = 104/117 (88%), Gaps = 2/117 (1%)
Strand = Plus / Plus
Query: 425 gtttggcagaccacccaaatcttgtgaagttaattgggttttgtgcagagggagagcaaa 484
|||||||||||||||| |||||||| || || ||||| |||||||| ||||||| ||| |
Sbjct: 2 gtttggcagaccaccctaatcttgtcaaattgattggattttgtgctgagggagtgcaga 61
Query: 485 ggctattggtttatgagtacatg-ccattaggatccttggagagccatttgcatgat 540
||||||||||||||||||||||| ||||| ||||| ||||||| |||||||| ||||
Sbjct: 62 ggctattggtttatgagtacatgcccattgggatctttggaga-ccatttgcttgat 117
>gnl|LJGI|TC75263 homologue to UniRef100_A7NW73 Cluster: Chromosome chr5 scaffold_2,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr5 scaffold_2, whole genome shotgun sequence
- Vitis vinifera (Grape), partial (67%)
Length = 1203
Score = 85.7 bits (43), Expect = 4e-16
Identities = 103/123 (83%)
Strand = Plus / Plus
Query: 694 catcccaagttatctgattttggcctggcaaaagttggtccaattggtgataagactcat 753
||||||||| |||| |||||||| ||||||||| |||| ||| |||| || |||||||||
Sbjct: 959 catcccaagctatcagattttgggctggcaaaacttgggccagttggcgacaagactcat 1018
Query: 754 gtttccactagagtaatgggtacttatgggtactgtgccccggattatgcaatgacgggt 813
|| || || |||||||||| || ||||| || |||||||| || ||||| ||||| |||
Sbjct: 1019 gtatctacacgagtaatgggaacatatggctattgtgccccagaatatgctatgactggt 1078
Query: 814 caa 816
|||
Sbjct: 1079 caa 1081
>gnl|LJGI|TC80105 similar to UniRef100_Q9MAY5 Cluster: Protein kinase 2; n=1; Populus
nigra|Rep: Protein kinase 2 - Populus nigra (Lombardy
poplar), partial (17%)
Length = 485
Score = 67.9 bits (34), Expect = 1e-10
Identities = 73/86 (84%)
Strand = Plus / Plus
Query: 235 acatttacttttgatgagcttgcaactgcaacagggaattttaggtcagattgcttcttg 294
||||| |||||| |||| |||| | |||||| || ||||||||| | |||||||| |||
Sbjct: 367 acattcacttttaatgaacttgaagttgcaaccggaaattttagggcggattgctttttg 426
Query: 295 ggtgaagggggatttggcaaggttta 320
|||||||| || ||||||||||||||
Sbjct: 427 ggtgaaggaggctttggcaaggttta 452
>gnl|LJGI|TC76672 homologue to UniRef100_A7Q9T6 Cluster: Chromosome chr8 scaffold_68,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr8 scaffold_68, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (38%)
Length = 729
Score = 60.0 bits (30), Expect = 2e-08
Identities = 33/34 (97%)
Strand = Plus / Plus
Query: 831 tgatgtatatagcttcggggttgttcttttggag 864
||||||||||||||| ||||||||||||||||||
Sbjct: 72 tgatgtatatagctttggggttgttcttttggag 105
>gnl|LJGI|TC57526 similar to UniRef100_A7NYZ7 Cluster: Chromosome chr6 scaffold_3,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr6 scaffold_3, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (74%)
Length = 1578
Score = 56.0 bits (28), Expect = 4e-07
Identities = 58/68 (85%)
Strand = Plus / Plus
Query: 706 tctgattttggcctggcaaaagttggtccaattggtgataagactcatgtttccactaga 765
||||||||||| ||||| | || ||| |||| ||||||||||| |||||||| ||||||
Sbjct: 667 tctgattttgggctggccagagatgggccaactggtgataagagccatgtttctactaga 726
Query: 766 gtaatggg 773
|| |||||
Sbjct: 727 gtcatggg 734
>gnl|LJGI|TC76548 similar to UniRef100_A7PST8 Cluster: Chromosome chr8 scaffold_29,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr8 scaffold_29, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (29%)
Length = 653
Score = 54.0 bits (27), Expect = 2e-06
Identities = 66/79 (83%)
Strand = Plus / Plus
Query: 340 ataaatcaggttgtagcaataaagcaactcaaccctcatgggcttcaaggaattagggaa 399
|||||||||||||| |||||||||||||| ||| |||| || ||||| | ||||||
Sbjct: 470 ataaatcaggttgttgcaataaagcaacttgaccgaaatggactgcaagggaatagggag 529
Query: 400 tttgttgttgaagtgttga 418
|| |||||||||||||||
Sbjct: 530 ttccttgttgaagtgttga 548