Miyakogusa Predicted Gene

Lj0g3v0316219.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0316219.1 Non Chatacterized Hit- tr|F6HCT8|F6HCT8_VITVI
Putative uncharacterized protein OS=Vitis vinifera GN=,61.02,2e-16,
,CUFF.21368.1
         (177 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|FS336705 weakly similar to UniRef100_A7R8I8 Cluster: Ch...   351   9e-97
gnl|LJGI|TC58625 weakly similar to UniRef100_A7R8I8 Cluster: Chr...   351   9e-97

>gnl|LJGI|FS336705 weakly similar to UniRef100_A7R8I8 Cluster: Chromosome undetermined
           scaffold_2601, whole genome shotgun sequence; n=1; Vitis
           vinifera|Rep: Chromosome undetermined scaffold_2601,
           whole genome shotgun sequence - Vitis vinifera (Grape),
           partial (27%)
          Length = 751

 Score =  351 bits (177), Expect = 9e-97
 Identities = 177/177 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgaagacaaaacaagagtttgagtgggttgaagcccagaatcttgtcttgagtaaggac 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 243 atgaagacaaaacaagagtttgagtgggttgaagcccagaatcttgtcttgagtaaggac 302

                                                                       
Query: 61  ctcataggtaccgcaaaacagcagcttctgtttcttgcagagattgataggaatcgctgt 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 303 ctcataggtaccgcaaaacagcagcttctgtttcttgcagagattgataggaatcgctgt 362

                                                                    
Query: 121 ctttatgatggccctgttttacacagagccatttacaggtacaaattctgttggctt 177
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 363 ctttatgatggccctgttttacacagagccatttacaggtacaaattctgttggctt 419


>gnl|LJGI|TC58625 weakly similar to UniRef100_A7R8I8 Cluster: Chromosome undetermined
           scaffold_2601, whole genome shotgun sequence; n=1; Vitis
           vinifera|Rep: Chromosome undetermined scaffold_2601,
           whole genome shotgun sequence - Vitis vinifera (Grape),
           partial (35%)
          Length = 765

 Score =  351 bits (177), Expect = 9e-97
 Identities = 177/177 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgaagacaaaacaagagtttgagtgggttgaagcccagaatcttgtcttgagtaaggac 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 168 atgaagacaaaacaagagtttgagtgggttgaagcccagaatcttgtcttgagtaaggac 227

                                                                       
Query: 61  ctcataggtaccgcaaaacagcagcttctgtttcttgcagagattgataggaatcgctgt 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 228 ctcataggtaccgcaaaacagcagcttctgtttcttgcagagattgataggaatcgctgt 287

                                                                    
Query: 121 ctttatgatggccctgttttacacagagccatttacaggtacaaattctgttggctt 177
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 288 ctttatgatggccctgttttacacagagccatttacaggtacaaattctgttggctt 344