Miyakogusa Predicted Gene

Lj0g3v0315899.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0315899.1 tr|Q9S843|Q9S843_ARATH At1g70640 OS=Arabidopsis
thaliana GN=F24J13.21 PE=2 SV=1,42.96,1e-18,SUBFAMILY NOT NAMED,NULL;
FAMILY NOT NAMED,NULL; CAD & PB1 domains,NULL; PB1 domain,Phox/Bem1p;
PB1,,CUFF.21341.1
         (674 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|FS318343 similar to UniRef100_A7PCS7 Cluster: Chromosom...    86   3e-16

>gnl|LJGI|FS318343 similar to UniRef100_A7PCS7 Cluster: Chromosome chr17 scaffold_12,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr17 scaffold_12, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (38%)
          Length = 704

 Score = 85.7 bits (43), Expect = 3e-16
 Identities = 96/113 (84%), Gaps = 3/113 (2%)
 Strand = Plus / Plus

                                                                       
Query: 224 cagaattgatggtgaagcttgtagagttgtgcggttcgtcc---gtgaccttgaggtgtc 280
           |||| ||||||| ||||||||  || ||||||||||| ||    |||||  ||| |||||
Sbjct: 170 cagatttgatggagaagcttggtgaattgtgcggttcatcgccggtgacactgaagtgtc 229

                                                                
Query: 281 aattgcccaagggagacttggagactttgatttccatcaccaacgacgaggat 333
           ||||||| || ||||||||||||||||||||||| ||||||| ||||||||||
Sbjct: 230 aattgccgaaaggagacttggagactttgatttcgatcaccagcgacgaggat 282



 Score = 63.9 bits (32), Expect = 1e-09
 Identities = 65/76 (85%)
 Strand = Plus / Plus

                                                                       
Query: 34  ctctgtagctacggtggcaagatcctacctcgccccaccgacggccaactccgttacgtc 93
           |||||||||||||| ||||||||||| || |||| ||||||||||   ||||| |||  |
Sbjct: 64  ctctgtagctacggcggcaagatcctcccccgcctcaccgacggcacgctccgctactcc 123

                           
Query: 94  ggcggacacaccagag 109
           ||||| ||||||||||
Sbjct: 124 ggcggccacaccagag 139