Miyakogusa Predicted Gene
- Lj0g3v0315359.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0315359.1 tr|B9HHZ5|B9HHZ5_POPTR Predicted protein
OS=Populus trichocarpa GN=POPTRDRAFT_564123 PE=4
SV=1,56.76,0.000000000002,coiled-coil,NULL; seg,NULL; GYF domain,GYF;
DUF4339,Domain of unknown function DUF4339,CUFF.21302.1
(699 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC72660 weakly similar to UniRef100_A7R292 Cluster: Chr... 1195 0.0
gnl|LJGI|TC70166 weakly similar to UniRef100_A9RHL7 Cluster: Pre... 507 e-143
>gnl|LJGI|TC72660 weakly similar to UniRef100_A7R292 Cluster: Chromosome undetermined
scaffold_409, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_409,
whole genome shotgun sequence - Vitis vinifera (Grape),
partial (49%)
Length = 722
Score = 1195 bits (603), Expect = 0.0
Identities = 634/639 (99%), Gaps = 4/639 (0%)
Strand = Plus / Plus
Query: 1 atggcttctgagaatggccatggaagccagccgcaaatttctggtgataatgttactgaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 83 atggcttctgagaatggccatggaagccagccgcaaatttctggtgataatgttactgaa 142
Query: 61 ttggggtggtacgttcttggtcaggatcaacagcagcttggtccttatgccttctctgag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 143 ttggggtggtacgttcttggtcaggatcaacagcagcttggtccttatgccttctctgag 202
Query: 121 ttgcgtgagcatttttcaaatggatacatattcgaaaatacacttgtgtggtctgaagga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 203 ttgcgtgagcatttttcaaatggatacatattcgaaaatacacttgtgtggtctgaagga 262
Query: 181 agaagtgagtggcagcccttgtcctcaatttcgagcttatgggctgaaattaaccaaggg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 263 agaagtgagtggcagcccttgtcctcaatttcgagcttatgggctgaaattaaccaaggg 322
Query: 241 gggcctgattcttcaactgcagtgtctgcccatgaggttgatgagtttgaaagatggcaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 323 gggcctgattcttcaactgcagtgtctgcccatgaggttgatgagtttgaaagatggcaa 382
Query: 301 agggagattcaggaggcagaggcgcaggtggaaggttcagagtttggctccatttccggc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 383 agggagattcaggaggcagaggcgcaggtggaaggttcagagtttggctccatttccggc 442
Query: 361 aatgttggcgatagtgtagcaggagaagattttgagagaccttcaacaccgcctgagggt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 443 aatgttggcgatagtgtagcaggagaagattttgagagaccttcaacaccgcctgagggt 502
Query: 421 gaagaagaatttaccgatgatgatgggactaaatataaatgggacaggaatttcagggtt 480
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 503 gaagaagaatttaccggtgatgatgggactaaatataaatgggacaggaatttcagggtt 562
Query: 481 tgggttccccaggagcatacgtctggcagcactgagccttatggggttgaagagatgact 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 563 tgggttccccaggagcatacgtctggcagcactgagccttatggggttgaagagatgact 622
Query: 541 ttcttaaaagaagatgaagtttttccattagctaattctgatgccccagaaaagtctgaa 600
||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||| |
Sbjct: 623 ttctt-aaagaagatgaagtttttccattagctaattctgatgccccag-aaagtctg-a 679
Query: 601 gatatttcaaaagtgagtgtttctgagagttccttaaag 639
||||||||||||||||||||||||||||| |||||||||
Sbjct: 680 gatatttcaaaagtgagtgtttctgagag-tccttaaag 717
>gnl|LJGI|TC70166 weakly similar to UniRef100_A9RHL7 Cluster: Predicted protein; n=1;
Physcomitrella patens subsp. patens|Rep: Predicted
protein - Physcomitrella patens subsp. patens, partial
(73%)
Length = 1545
Score = 507 bits (256), Expect = e-143
Identities = 256/256 (100%)
Strand = Plus / Plus
Query: 444 tgggactaaatataaatgggacaggaatttcagggtttgggttccccaggagcatacgtc 503
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tgggactaaatataaatgggacaggaatttcagggtttgggttccccaggagcatacgtc 60
Query: 504 tggcagcactgagccttatggggttgaagagatgactttcttaaaagaagatgaagtttt 563
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 tggcagcactgagccttatggggttgaagagatgactttcttaaaagaagatgaagtttt 120
Query: 564 tccattagctaattctgatgccccagaaaagtctgaagatatttcaaaagtgagtgtttc 623
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 tccattagctaattctgatgccccagaaaagtctgaagatatttcaaaagtgagtgtttc 180
Query: 624 tgagagttccttaaaggaagaagcaaatgaagcaaataatcccaatacggtagcagatgg 683
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 tgagagttccttaaaggaagaagcaaatgaagcaaataatcccaatacggtagcagatgg 240
Query: 684 aaagaggaagctttct 699
||||||||||||||||
Sbjct: 241 aaagaggaagctttct 256