Miyakogusa Predicted Gene
- Lj0g3v0314699.2
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0314699.2 Non Chatacterized Hit- tr|I1KKV7|I1KKV7_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,85.13,0,no
description,Zinc finger, RING/FYVE/PHD-type; INTEGRATOR COMPLEX
SUBUNIT 11,NULL; CLEAVAGE AND POL,CUFF.21260.2
(795 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC80085 similar to UniRef100_A7P3V3 Cluster: Chromosome... 529 e-150
gnl|LJGI|TC65678 similar to UniRef100_A7P3V3 Cluster: Chromosome... 470 e-132
>gnl|LJGI|TC80085 similar to UniRef100_A7P3V3 Cluster: Chromosome chr1 scaffold_5,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr1 scaffold_5, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (44%)
Length = 791
Score = 529 bits (267), Expect = e-150
Identities = 276/279 (98%)
Strand = Plus / Plus
Query: 515 acagatttcaaatactaaacaatgaggaaaagcctagtggtggagccggatcaatggttc 574
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 212 acagatttcaaatactaaacaatgaggaaaagcctagtggtggagccggatcaatggttc 271
Query: 575 ccacagaaaccagcagtgcttacttggcaaatgaaagaacacttttacctgaggatgcgg 634
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 272 ccacagaaaccagcagtgcttacttggcaaatgaaagaacacttttacctgaggatgcgg 331
Query: 635 aatgctgtatatgcctctgttcatatgaggacggagtagagctccatgctcttccctgca 694
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 332 aatgctgtatatgcctctgttcatatgaggacggagtagagctccatgctcttccctgcc 391
Query: 695 atcatcatttccatgcttcatgcatagtaaaatggctaaagatgaatgcaacttgtcccc 754
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 392 atcatcatttccatgcttcatgcatagtcaaatggctaaagatgaatgcaacttgtcccc 451
Query: 755 tttgcaagtacaatattctcaagggaaacgaacaggtat 793
||||| |||||||||||||||||||||||||||||||||
Sbjct: 452 tttgccagtacaatattctcaagggaaacgaacaggtat 490
Score = 426 bits (215), Expect = e-119
Identities = 215/215 (100%)
Strand = Plus / Plus
Query: 260 cattcatttggtggatggtgggcttttactgggttgtctctggtggtgatatgcttatgc 319
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 cattcatttggtggatggtgggcttttactgggttgtctctggtggtgatatgcttatgc 60
Query: 320 aggatgccccacggttgtactggttggctgttgtttttctggcttttgatgtattctttg 379
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 aggatgccccacggttgtactggttggctgttgtttttctggcttttgatgtattctttg 120
Query: 380 ccatcttctgtgttgttttggcatgcttgattggcattgctctctgttgttgcttgccct 439
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 ccatcttctgtgttgttttggcatgcttgattggcattgctctctgttgttgcttgccct 180
Query: 440 gcatcattgctattctctatgctgttgctggacag 474
|||||||||||||||||||||||||||||||||||
Sbjct: 181 gcatcattgctattctctatgctgttgctggacag 215
>gnl|LJGI|TC65678 similar to UniRef100_A7P3V3 Cluster: Chromosome chr1 scaffold_5,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr1 scaffold_5, whole genome shotgun sequence
- Vitis vinifera (Grape), partial (75%)
Length = 1663
Score = 470 bits (237), Expect = e-132
Identities = 462/537 (86%)
Strand = Plus / Plus
Query: 255 ggtttcattcatttggtggatggtgggcttttactgggttgtctctggtggtgatatgct 314
||||||||| |||||||||||||||||||||||||||| |||| |||||||||| | ||
Sbjct: 590 ggtttcattgctttggtggatggtgggcttttactgggtagtctgtggtggtgatgttct 649
Query: 315 tatgcaggatgccccacggttgtactggttggctgttgtttttctggcttttgatgtatt 374
| |||| ||||| ||||| |||||||||||||||||||| |||||||| |||||||| ||
Sbjct: 650 tctgcaagatgctccacgtttgtactggttggctgttgtctttctggcatttgatgtctt 709
Query: 375 ctttgccatcttctgtgttgttttggcatgcttgattggcattgctctctgttgttgctt 434
|||||||||||| |||||||||||||||||||||||||||||||| ||||| ||||| ||
Sbjct: 710 ctttgccatcttttgtgttgttttggcatgcttgattggcattgccctctgctgttgttt 769
Query: 435 gccctgcatcattgctattctctatgctgttgctggacaggaaggtgcttcagaagcaga 494
||| || || |||| ||||||||||||||||||||||||||| ||||| || ||| ||||
Sbjct: 770 gccatgtattattggtattctctatgctgttgctggacaggagggtgcatctgaatcaga 829
Query: 495 tcttagtatacttccgaaatacagatttcaaatactaaacaatgaggaaaagcctagtgg 554
| | | ||||||| ||||||||||||||||| || ||||| ||||| |||||||
Sbjct: 830 tatcggcgtacttccaaaatacagatttcaaatgtcaagcaatggggaaacacctagtga 889
Query: 555 tggagccggatcaatggttcccacagaaaccagcagtgcttacttggcaaatgaaagaac 614
|||| ||||||||||||||| ||||||| ||| | || | |||||||||| || |
Sbjct: 890 aggaggtggatcaatggttcccctagaaaccggcatcggtttcccggcaaatgaacgagc 949
Query: 615 acttttacctgaggatgcggaatgctgtatatgcctctgttcatatgaggacggagtaga 674
||||| ||| ||||||||||| |||||||||||| ||| ||| |||||||| |||| |||
Sbjct: 950 actttcacccgaggatgcggagtgctgtatatgcatctcttcttatgaggatggagcaga 1009
Query: 675 gctccatgctcttccctgcaatcatcatttccatgcttcatgcatagtaaaatggctaaa 734
|| ||| ||||||| || || |||||||||||| || |||||||||| || ||| ||||
Sbjct: 1010 acttcattctcttccatgtaaccatcatttccattctacatgcatagtgaagtggttaaa 1069
Query: 735 gatgaatgcaacttgtcccctttgcaagtacaatattctcaagggaaacgaacaggt 791
|||||||||||||||||| |||||||||||||||||||| |||||||| ||||||||
Sbjct: 1070 gatgaatgcaacttgtcctctttgcaagtacaatattcttaagggaaatgaacaggt 1126
Score = 52.0 bits (26), Expect = 5e-06
Identities = 65/78 (83%)
Strand = Plus / Plus
Query: 31 aacacgccgatccggctgtggattgtcggctacgcgctgcagtgcctcttgcatgtcgtg 90
||||||||||||||| ||||||| ||| |||||| | |||||||| | || |||||
Sbjct: 360 aacacgccgatccggttgtggatctgcggttacgcggttcagtgcctggttcacctcgtg 419
Query: 91 ctggtgtggttcgagtac 108
||||||||| ||||||||
Sbjct: 420 ctggtgtggctcgagtac 437