Miyakogusa Predicted Gene
- Lj0g3v0314629.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0314629.1 CUFF.21248.1
(2089 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|FS327854 weakly similar to UniRef100_A7QNZ8 Cluster: Ch... 1201 0.0
gnl|LJGI|FS354181 weakly similar to UniRef100_A7QNZ8 Cluster: Ch... 817 0.0
gnl|LJGI|TC69532 similar to UniRef100_A7QS12 Cluster: Chromosome... 80 6e-14
gnl|LJGI|BP056320 similar to UniRef100_A7QDM2 Cluster: Chromosom... 62 1e-08
>gnl|LJGI|FS327854 weakly similar to UniRef100_A7QNZ8 Cluster: Chromosome chr1
scaffold_135, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr1 scaffold_135, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (9%)
Length = 753
Score = 1201 bits (606), Expect = 0.0
Identities = 609/610 (99%)
Strand = Plus / Plus
Query: 1 atgttgtcatggactacacaaaaagttcccagatgctgctggtttcaagtttcaacacgg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 144 atgttgtcatggactacacaaaaagttcccagatgctgctggtttcaagtttcaacacgg 203
Query: 61 aaactgcggccctttatctcactcaactcttatgtctctaactcttaccacttgagctat 120
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 aaactgcggcccttcatctcactcaactcttatgtctctaactcttaccacttgagctat 263
Query: 121 cgttcggggacgaaactgtggccgttgatgcaacagcgccaccaatcactctccttctcc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 cgttcggggacgaaactgtggccgttgatgcaacagcgccaccaatcactctccttctcc 323
Query: 181 ttcatcagagcccaaacaactaccacacctcgaaatcctagtgactgtgtctacaccaag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 ttcatcagagcccaaacaactaccacacctcgaaatcctagtgactgtgtctacaccaag 383
Query: 241 aaccgcgaaatcgatgctttcataaaatccagggacctgaactctgcacttgcagtgttc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 aaccgcgaaatcgatgctttcataaaatccagggacctgaactctgcacttgcagtgttc 443
Query: 301 cacaccatgccactgcgtgacactgtcacctacaacttgctcatctccgcgtggtgcttt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 cacaccatgccactgcgtgacactgtcacctacaacttgctcatctccgcgtggtgcttt 503
Query: 361 ccaccggaacaggctcttcatctctacggcgaaatgggtctgctcggaatcagagaaacc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 ccaccggaacaggctcttcatctctacggcgaaatgggtctgctcggaatcagagaaacc 563
Query: 421 tcaaccacgttctcctctgttttagctgtctgtgcccgttctgggttccatagagaaggt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 tcaaccacgttctcctctgttttagctgtctgtgcccgttctgggttccatagagaaggt 623
Query: 481 gttcaggtgcattgtagggtggtcaagtttggatttttgtcgaatgtgttcgttggtggc 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 gttcaggtgcattgtagggtggtcaagtttggatttttgtcgaatgtgttcgttggtggc 683
Query: 541 acgcttgttggtttctacttgaatgtgggactgagggaggttgcacgggaattgtttgat 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 684 acgcttgttggtttctacttgaatgtgggactgagggaggttgcacgggaattgtttgat 743
Query: 601 gagttgcctg 610
||||||||||
Sbjct: 744 gagttgcctg 753
>gnl|LJGI|FS354181 weakly similar to UniRef100_A7QNZ8 Cluster: Chromosome chr1
scaffold_135, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr1 scaffold_135, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (20%)
Length = 659
Score = 817 bits (412), Expect = 0.0
Identities = 412/412 (100%)
Strand = Plus / Minus
Query: 1678 aatcacacgggaatggtcaaggaaggaagaatactatttgactcgatgaaatctgttcat 1737
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 659 aatcacacgggaatggtcaaggaaggaagaatactatttgactcgatgaaatctgttcat 600
Query: 1738 ggggttcaaccagatcagcggcatttttcatgcatggtggatcttctttgccgcgcagga 1797
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 599 ggggttcaaccagatcagcggcatttttcatgcatggtggatcttctttgccgcgcagga 540
Query: 1798 cttctacatgaagctgaagagttactgctacagacaccagataaaagagactgttttatg 1857
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 539 cttctacatgaagctgaagagttactgctacagacaccagataaaagagactgttttatg 480
Query: 1858 tggagctctttgctgcgaagttgcaggagccacaagaatgaagaggttggaacaagagca 1917
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 479 tggagctctttgctgcgaagttgcaggagccacaagaatgaagaggttggaacaagagca 420
Query: 1918 gcacaagtgttagttgaactagacccagatgatcctgcagtgtggttgcaagcttcaaat 1977
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 419 gcacaagtgttagttgaactagacccagatgatcctgcagtgtggttgcaagcttcaaat 360
Query: 1978 ttttatgctgagatagggaattttgatgcctcaagggaaatcagagaggttgctctagca 2037
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 359 ttttatgctgagatagggaattttgatgcctcaagggaaatcagagaggttgctctagca 300
Query: 2038 aggaagatgactagggagatcggtcatagttcaattgagataagacagtgac 2089
||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 299 aggaagatgactagggagatcggtcatagttcaattgagataagacagtgac 248
>gnl|LJGI|TC69532 similar to UniRef100_A7QS12 Cluster: Chromosome undetermined
scaffold_155, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_155,
whole genome shotgun sequence - Vitis vinifera (Grape),
partial (4%)
Length = 1014
Score = 79.8 bits (40), Expect = 6e-14
Identities = 46/48 (95%)
Strand = Plus / Plus
Query: 84 caactcttatgtctctaactcttaccacttgagctatcgttcggggac 131
||||||||||||| |||||||||||||||||||||||| |||||||||
Sbjct: 367 caactcttatgtccctaactcttaccacttgagctatcattcggggac 414
>gnl|LJGI|BP056320 similar to UniRef100_A7QDM2 Cluster: Chromosome chr10 scaffold_81,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr10 scaffold_81, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (16%)
Length = 456
Score = 61.9 bits (31), Expect = 1e-08
Identities = 46/51 (90%)
Strand = Plus / Plus
Query: 84 caactcttatgtctctaactcttaccacttgagctatcgttcggggacgaa 134
|||| |||||||| || |||||||||||||||||||| ||||||||||||
Sbjct: 78 caacccttatgtccatagctcttaccacttgagctatcattcggggacgaa 128