Miyakogusa Predicted Gene
- Lj0g3v0314529.2
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0314529.2 Non Chatacterized Hit- tr|I1JCX9|I1JCX9_SOYBN
Uncharacterized protein (Fragment) OS=Glycine max
PE=4,58.33,0.00000002,FAMILY NOT NAMED,NULL; F-box domain,F-box
domain, cyclin-like; RNI-like,NULL; FBOX,F-box domain,
cyc,CUFF.21234.2
(1095 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|BW594333 similar to UniRef100_A6EKJ1 Cluster: Two-compo... 876 0.0
gnl|LJGI|BI420296 weakly similar to UniRef100_A2Q574 Cluster: Cy... 856 0.0
gnl|LJGI|BP063614 similar to UniRef100_A2Q574 Cluster: Cyclin-li... 66 5e-10
gnl|LJGI|BP071245 similar to UniRef100_A2Q574 Cluster: Cyclin-li... 54 2e-06
>gnl|LJGI|BW594333 similar to UniRef100_A6EKJ1 Cluster: Two-component system sensor
histidine kinase/response regulator hybrid; n=1;
Pedobacter, partial (2%)
Length = 486
Score = 876 bits (442), Expect = 0.0
Identities = 445/446 (99%)
Strand = Plus / Plus
Query: 650 gtttgaccatagctagtaccattcaagaagtggactacaaaatcgtgctttctactccaa 709
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2 gtttgaccatagctagtaccattcaagaagtggactacaaaatcgtgctttctactccaa 61
Query: 710 accttagttctctctccatcacgcgttatcctattcaccaagtgtccgcgtgcgatcttt 769
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 62 accttagttctctctccatcacgcgttatcctattcaccaagtgtccgcgtgcgatcttt 121
Query: 770 cttatctcgaacaagtaaatattgacgttgaagcccattttcatactaattctgagagga 829
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122 cttatctcgaacaagtaaatattgacgttgaagcccattttcatactaattctgagagga 181
Query: 830 cacatttagccctgattagttggctggaagtgcttgctagctatgtgaagataatggtac 889
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 182 cacatttagccctgattagttggctggaagtgcttgctagctatgtgaagataatggtac 241
Query: 890 tctcttcaagtacccttaaggtactacatgttctctcttcttctggttcaacgatgagcc 949
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 242 tctcttcaagtacccttaaggtactaaatgttctctcttcttctggttcaacgatgagcc 301
Query: 950 aacttccttgctttgttagattgaagtcattgaaattgaaaatgaaatcttcttcctata 1009
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 302 aacttccttgctttgttagattgaagtcattgaaattgaaaatgaaatcttcttcctata 361
Query: 1010 tatctgatgaggaagtaagcaggatagtggagtgcttggttcgaaactctccactggtcg 1069
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 362 tatctgatgaggaagtaagcaggatagtggagtgcttggttcgaaactctccactggtcg 421
Query: 1070 aagttgatattatagattgctgagtg 1095
||||||||||||||||||||||||||
Sbjct: 422 aagttgatattatagattgctgagtg 447
>gnl|LJGI|BI420296 weakly similar to UniRef100_A2Q574 Cluster: Cyclin-like F-box; n=1;
Medicago truncatula|Rep: Cyclin-like F-box - Medicago
truncatula (Barrel medic), partial (15%)
Length = 592
Score = 856 bits (432), Expect = 0.0
Identities = 432/432 (100%)
Strand = Plus / Plus
Query: 1 atggagggtgagagagatggaaaagaggaaagagacagactcagtgacttgcctgactta 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 161 atggagggtgagagagatggaaaagaggaaagagacagactcagtgacttgcctgactta 220
Query: 61 gttttgcttcatgttttgaaatttatgagcacaaaacaagctgttcagacttgtgtattg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 221 gttttgcttcatgttttgaaatttatgagcacaaaacaagctgttcagacttgtgtattg 280
Query: 121 tccacaagatggaaggatctctggaaaggtgtcactactcttgcattgaattcctccgac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 281 tccacaagatggaaggatctctggaaaggtgtcactactcttgcattgaattcctccgac 340
Query: 181 ttcgccaccgcgccccgtttcagcgagtttctgtcttgcgttctgtctcaccggaacgac 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 341 ttcgccaccgcgccccgtttcagcgagtttctgtcttgcgttctgtctcaccggaacgac 400
Query: 241 tcagtttccctgcataatcttgatttgaggcgcaaaggttgcgttgagccggaactcctc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 401 tcagtttccctgcataatcttgatttgaggcgcaaaggttgcgttgagccggaactcctc 460
Query: 301 aacagggtcatgagctatgctgtgtcacatgatgtccagagcttgacaatagaatttaat 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 461 aacagggtcatgagctatgctgtgtcacatgatgtccagagcttgacaatagaatttaat 520
Query: 361 ttgtatttaaaacttggttttaagctgcacccttgcatcttttcgtgtcggacattgaca 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 521 ttgtatttaaaacttggttttaagctgcacccttgcatcttttcgtgtcggacattgaca 580
Query: 421 tatcttaagctt 432
||||||||||||
Sbjct: 581 tatcttaagctt 592
>gnl|LJGI|BP063614 similar to UniRef100_A2Q574 Cluster: Cyclin-like F-box; n=1;
Medicago truncatula|Rep: Cyclin-like F-box - Medicago
truncatula (Barrel medic), partial (14%)
Length = 508
Score = 65.9 bits (33), Expect = 5e-10
Identities = 42/45 (93%)
Strand = Plus / Plus
Query: 103 gttcagacttgtgtattgtccacaagatggaaggatctctggaaa 147
||||| ||||| ||||||||||||||||||||||||||||||||
Sbjct: 236 gttcaaacttgcatattgtccacaagatggaaggatctctggaaa 280
>gnl|LJGI|BP071245 similar to UniRef100_A2Q574 Cluster: Cyclin-like F-box; n=1;
Medicago truncatula|Rep: Cyclin-like F-box - Medicago
truncatula (Barrel medic), partial (13%)
Length = 552
Score = 54.0 bits (27), Expect = 2e-06
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 121 tccacaagatggaaggatctctggaaa 147
|||||||||||||||||||||||||||
Sbjct: 469 tccacaagatggaaggatctctggaaa 495