Miyakogusa Predicted Gene

Lj0g3v0314249.1

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0314249.1 Non Chatacterized Hit- tr|D7SP48|D7SP48_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,71.77,0,seg,NULL; HATPase_c_3,NULL; ATPase domain of HSP90
chaperone/DNA topoisomerase II/histidine kinase,A,CUFF.21216.1
         (1032 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC73368 similar to UniRef100_A7QE44 Cluster: Chromosome...  1170   0.0  
gnl|LJGI|FS319820 similar to UniRef100_A7PCW6 Cluster: Chromosom...    68   1e-10

>gnl|LJGI|TC73368 similar to UniRef100_A7QE44 Cluster: Chromosome chr4 scaffold_83,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr4 scaffold_83, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (20%)
          Length = 689

 Score = 1170 bits (590), Expect = 0.0
 Identities = 602/606 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgtctctgattcccaaaactgagaaagacgacgacgttcccgtcgtcgaccttgatagt 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 84  atgtctctgattcccaaaactgagaaagacgacgacgttcccgtcgtcgaccttgatagt 143

                                                                       
Query: 61  accgaaaactccgccgtcgctgcgggtgaagtgaacgacgcggcggctccaccgggggcg 120
           ||||||||||||||||||||||| | ||||||||||||||||||||||||||||| ||||
Sbjct: 144 accgaaaactccgccgtcgctgctgttgaagtgaacgacgcggcggctccaccggtggcg 203

                                                                       
Query: 121 gcggcgccgatacaagttgagcctccgctgccgaagaatacccctgcctcaaattcagct 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 gcggcgccgatacaagttgagcctccgctgccgaagaatacccctgcctcaaattcagct 263

                                                                       
Query: 181 cctgtttattcccgaagcttctggaaagccggtgattacgttgttggtccctctgtaaag 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 cctgtttattcccgaagcttctggaaagccggtgattacgttgttggtccctctgtaaag 323

                                                                       
Query: 241 ccagcttctgatcaaggttacttggaacatgcacgggttcaccccaagtttctgcattct 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 ccagcttctgatcaaggttacttggaacatgcacgggttcaccccaagtttctgcattct 383

                                                                       
Query: 301 aatgcaacttctcataagtgggcttttggagcaattgctgagctggtggataatgctgtt 360
           ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 384 aatgcaacttctcataagtgggcttttggagcaattgatgagctggtggataatgctgtt 443

                                                                       
Query: 361 gatgagattcaaaatggtgcaacttttgtaaaggttgataagattgataacatgaaggat 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 gatgagattcaaaatggtgcaacttttgtaaaggttgataagattgataacatgaaggat 503

                                                                       
Query: 421 aattcaccagtgttatgtttccaagatgatggtggtggaatggatccgaactcaatacga 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 aattcaccagtgttatgtttccaagatgatggtggtggaatggatccgaactcaatacga 563

                                                                       
Query: 481 aaatgcatgagcttgggttattcctcaaagaagtcaaagacaacaattggacaatatggt 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 aaatgcatgagcttgggttattcctcaaagaagtcaaagacaacaattggacaatatggt 623

                                                                       
Query: 541 aatgggttcaagactagtactatgagattgggtgctgatgcaattgttttcagtcgtgca 600
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 aatgggttcaagactagtactatgagattgggtgctgatgcaattgttttcagtcgtgca 683

                 
Query: 601 gtaaat 606
           ||||||
Sbjct: 684 gtaaat 689


>gnl|LJGI|FS319820 similar to UniRef100_A7PCW6 Cluster: Chromosome chr17 scaffold_12,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr17 scaffold_12, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (22%)
          Length = 680

 Score = 67.9 bits (34), Expect = 1e-10
 Identities = 82/98 (83%)
 Strand = Plus / Plus

                                                                       
Query: 280 caccccaagtttctgcattctaatgcaacttctcataagtgggcttttggagcaattgct 339
           ||||||| ||| || || || ||||||||||| ||||||||||| ||||| || || || 
Sbjct: 463 caccccatgttccttcactcaaatgcaacttcacataagtgggcatttggtgccatagca 522

                                                 
Query: 340 gagctggtggataatgctgttgatgagattcaaaatgg 377
           |||||  | |||||||| ||||||||||| ||||||||
Sbjct: 523 gagcttcttgataatgcagttgatgagatccaaaatgg 560



 Score = 54.0 bits (27), Expect = 2e-06
 Identities = 27/27 (100%)
 Strand = Plus / Plus

                                      
Query: 442 caagatgatggtggtggaatggatccg 468
           |||||||||||||||||||||||||||
Sbjct: 625 caagatgatggtggtggaatggatccg 651