Miyakogusa Predicted Gene
- Lj0g3v0314209.3
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0314209.3 tr|G5ASE5|G5ASE5_HETGA Nucleoporin GLE1
OS=Heterocephalus glaber GN=GW7_01915 PE=4 SV=1,30.34,3e-19,SUBFAMILY
NOT NAMED,NULL; GLE-1-RELATED,GLE1-like; GLE1,GLE1-like,CUFF.21213.3
(552 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC64752 similar to UniRef100_A7P477 Cluster: Chromosome... 1055 0.0
gnl|LJGI|FS346230 weakly similar to UniRef100_A7P477 Cluster: Ch... 718 0.0
>gnl|LJGI|TC64752 similar to UniRef100_A7P477 Cluster: Chromosome chr1 scaffold_5,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr1 scaffold_5, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (33%)
Length = 1158
Score = 1055 bits (532), Expect = 0.0
Identities = 547/552 (99%)
Strand = Plus / Plus
Query: 1 atggatattttgctagctgagcttcacagggtgtgcccatacactgtcccaaaacatatg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 251 atggatattttgctagctgagcttcacagggtgtgcccatacactgtcccaaaacatatg 310
Query: 61 gtttacaaaaagtctacctttcattcaagagaggcatacctcaaaagcattggttattgg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 311 gtttacaaaaagtctacctttcattcaagagaggcatacctcaaaagcattggttattgg 370
Query: 121 gaagaaaatggaaagatggagaatacagaagattatttacagcggttagaatcgtatgtg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 371 gaagaaaatggaaagatggagaatacagaagattatttacagcggttagaatcgtatgtg 430
Query: 181 aagatgtatgctgcactggttcagactgaggttcctaaggttcagaatttgcatggctta 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 431 aagatgtatgctgcactggttcagactgaggttcctaaggttcagaatttgcatggctta 490
Query: 241 caacatggttgggcatggctttccaggttctttaatgctctttccgcccatcaatataca 300
||||||||||||||||||||| |||||||||| ||||||||| | ||| |||||||||||
Sbjct: 491 caacatggttgggcatggcttgccaggttcttgaatgctcttccagccaatcaatataca 550
Query: 301 gctgtttcgctcgatgcattcttgcgaatggctggatttgctctctttagaagatataaa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 551 gctgtttcgctcgatgcattcttgcgaatggctggatttgctctctttagaagatataaa 610
Query: 361 tctcaattcctaaagatgttgaatgtcatctcagagaactttttagttgatataaaatca 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 611 tctcaattcctaaagatgttgaatgtcatctcagagaactttttagttgatataaaatca 670
Query: 421 ctaaatgcaccagaattgagaaagactgttgcagagatacagacttatatagaagataag 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 671 ctaaatgcaccagaattgagaaagactgttgcagagatacagacttatatagaagataag 730
Query: 481 atgttccttcaagagccagaaggaaggagcctgcaaactaatttgttatcgaaggaatgt 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 731 atgttccttcaagagccagaaggaaggagcctgcaaactaatttgttatcgaaggaatgt 790
Query: 541 gttgttcgttga 552
||||||||||||
Sbjct: 791 gttgttcgttga 802
>gnl|LJGI|FS346230 weakly similar to UniRef100_A7P477 Cluster: Chromosome chr1
scaffold_5, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr1 scaffold_5, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (27%)
Length = 785
Score = 718 bits (362), Expect = 0.0
Identities = 446/474 (94%)
Strand = Plus / Minus
Query: 79 tttcattcaagagaggcatacctcaaaagcattggttattgggaagaaaatggaaagatg 138
||||| |||| |||||||||| |||||||||| ||||||||||||||||||||||| |||
Sbjct: 785 tttcaatcaaaagaggcatacttcaaaagcatcggttattgggaagaaaatggaaaaatg 726
Query: 139 gagaatacagaagattatttacagcggttagaatcgtatgtgaagatgtatgctgcactg 198
|||| ||||||||||||||||||| |||||||||| ||||||||||||||||||||||||
Sbjct: 725 gagagtacagaagattatttacagaggttagaatcctatgtgaagatgtatgctgcactg 666
Query: 199 gttcagactgaggttcctaaggttcagaatttgcatggcttacaacatggttgggcatgg 258
|||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 665 gttcagactgagattcctaaggttcaaaatttgcatggcttacaacatggttgggcatgg 606
Query: 259 ctttccaggttctttaatgctctttccgcccatcaatatacagctgtttcgctcgatgca 318
||| | |||||||| ||| ||||| | ||| |||||||||||||||||||||||||||||
Sbjct: 605 cttgcgaggttcttgaattctcttccagccaatcaatatacagctgtttcgctcgatgca 546
Query: 319 ttcttgcgaatggctggatttgctctctttagaagatataaatctcaattcctaaagatg 378
|||||||||||||||||||| ||||| |||||||||||||||||||||||| ||||||||
Sbjct: 545 ttcttgcgaatggctggattcgctctttttagaagatataaatctcaattcttaaagatg 486
Query: 379 ttgaatgtcatctcagagaactttttagttgatataaaatcactaaatgcaccagaattg 438
||||| ||||||||||||||||||||||||| | ||||||| ||||||||||||||||
Sbjct: 485 ttgaacaccatctcagagaactttttagttgatctgaaatcacgaaatgcaccagaattg 426
Query: 439 agaaagactgttgcagagatacagacttatatagaagataagatgttccttcaagagcca 498
||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 425 agaaagactattgcggagatacagacttatatagaagataagatgttccttcaagagcca 366
Query: 499 gaaggaaggagcctgcaaactaatttgttatcgaaggaatgtgttgttcgttga 552
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 365 gaaggaaggagcctgcaaactaatttgttatcgaaggaatgtgttgttcgttga 312