Miyakogusa Predicted Gene

Lj0g3v0314179.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0314179.1 Non Chatacterized Hit- tr|I3SQ21|I3SQ21_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2 SV=1,38.2,0.00000002,
,CUFF.21207.1
         (295 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|DC599890 similar to UniRef100_A7QK60 Cluster: Chromosom...    56   1e-07
gnl|LJGI|TC63810 weakly similar to UniRef100_A7QK65 Cluster: Chr...    54   5e-07

>gnl|LJGI|DC599890 similar to UniRef100_A7QK60 Cluster: Chromosome chr19 scaffold_111,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr19 scaffold_111, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (19%)
          Length = 598

 Score = 56.0 bits (28), Expect = 1e-07
 Identities = 37/40 (92%)
 Strand = Plus / Plus

                                                   
Query: 57  cagcattttcagctgcacaaccctggttgttcttaagttg 96
           ||||||||||||||||| ||| ||||||||||| ||||||
Sbjct: 421 cagcattttcagctgcaaaactctggttgttctcaagttg 460


>gnl|LJGI|TC63810 weakly similar to UniRef100_A7QK65 Cluster: Chromosome chr19
           scaffold_111, whole genome shotgun sequence; n=1; Vitis
           vinifera|Rep: Chromosome chr19 scaffold_111, whole
           genome shotgun sequence - Vitis vinifera (Grape),
           partial (18%)
          Length = 750

 Score = 54.0 bits (27), Expect = 5e-07
 Identities = 36/39 (92%)
 Strand = Plus / Plus

                                                  
Query: 59  gcattttcagctgcacaaccctggttgttcttaagttgg 97
           ||||||||||||||| ||| |||||||||||| ||||||
Sbjct: 624 gcattttcagctgcaaaactctggttgttcttgagttgg 662