Miyakogusa Predicted Gene
- Lj0g3v0313719.3
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0313719.3 Non Chatacterized Hit- tr|I1KWS2|I1KWS2_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.33907
PE,72.43,0,Cse1,Exportin/Importin, Cse1-like; ARM
repeat,Armadillo-type fold; no description,Armadillo-like
hel,CUFF.21186.3
(1746 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|FS321710 similar to UniRef100_A7Q9N9 Cluster: Chromosom... 702 0.0
gnl|LJGI|BU494412 homologue to UniRef100_A7Q9N9 Cluster: Chromos... 351 9e-96
gnl|LJGI|TC78008 similar to UniRef100_A7Q9N9 Cluster: Chromosome... 119 6e-26
gnl|LJGI|TC69285 similar to UniRef100_A7Q9N9 Cluster: Chromosome... 86 9e-16
>gnl|LJGI|FS321710 similar to UniRef100_A7Q9N9 Cluster: Chromosome chr5 scaffold_67,
whole genome shotgun sequence; n=2; Vitis vinifera|Rep:
Chromosome chr5 scaffold_67, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (15%)
Length = 760
Score = 702 bits (354), Expect = 0.0
Identities = 354/354 (100%)
Strand = Plus / Plus
Query: 4 gatgtccaacataggatgttgcagagtgatgaagacatggtgagggataacattctcata 63
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 407 gatgtccaacataggatgttgcagagtgatgaagacatggtgagggataacattctcata 466
Query: 64 tttatcacccaagttcctcctttattgaggatacaacttggggaatgcctaaaaacaatc 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 467 tttatcacccaagttcctcctttattgaggatacaacttggggaatgcctaaaaacaatc 526
Query: 124 ataaattctgattatcctgtaaagtggcctcatcctcttgaatgggtgaagcataactta 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 527 ataaattctgattatcctgtaaagtggcctcatcctcttgaatgggtgaagcataactta 586
Query: 184 cggtgtgaagaagaagtatattgtgccttatttgtgctgcagattctctctaaaagattc 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 587 cggtgtgaagaagaagtatattgtgccttatttgtgctgcagattctctctaaaagattc 646
Query: 244 atgttaatttcaactaagaagggggcacctggttatcacattgttgaggaaacatttccc 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 647 atgttaatttcaactaagaagggggcacctggttatcacattgttgaggaaacatttccc 706
Query: 304 caccttcgatatatatttaacaggcttgtccaaattgttaatccatcacttgaa 357
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 707 caccttcgatatatatttaacaggcttgtccaaattgttaatccatcacttgaa 760
>gnl|LJGI|BU494412 homologue to UniRef100_A7Q9N9 Cluster: Chromosome chr5 scaffold_67,
whole genome shotgun sequence; n=2; Vitis vinifera|Rep:
Chromosome chr5 scaffold_67, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (11%)
Length = 329
Score = 351 bits (177), Expect = 9e-96
Identities = 276/309 (89%)
Strand = Plus / Plus
Query: 1128 cgagccatacaaatctgaacttgagcacatgttagtgcatcatgtctttcctgagttaaa 1187
|||||| ||||||||||||||||||| ||||||||||| ||||||||||||||||| ||
Sbjct: 18 cgagccgtacaaatctgaacttgagcgtatgttagtgcaacatgtctttcctgagtttaa 77
Query: 1188 cagtcctgttggccaccttcgagctaaggcggcatgggttgcaggacaatatgcccatat 1247
||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||
Sbjct: 78 cagtcctgttggccaccttagagctaaggcagcatgggttgcaggacaatatgcccatat 137
Query: 1248 tagcttctcatatcagaacaatttccagagggcattgcagtgtattgtgttaagattaca 1307
|| ||||||| ||||||||||||||| |||||||||||||||| |||| | ||| | ||
Sbjct: 138 taacttctcagatcagaacaatttccggagggcattgcagtgtgttgtatccagaatgca 197
Query: 1308 ggattctgaacttcctgtgcgcgttgattcttttgttgctttgcgttctttcattgaagc 1367
||| | |||||||||||||| || |||||| || |||||||||||||||| ||||||||
Sbjct: 198 agatcccgaacttcctgtgcgtgtggattctgtttttgctttgcgttcttttattgaagc 257
Query: 1368 atgtaaagatatgaatgaaatctttcccattcttcctcgactccttgatgagttttccaa 1427
|| |||||| ||||||||||| ||| |||||||||| |||||||||||||||| |||
Sbjct: 258 ttgcaaagatttgaatgaaatccgtcctattcttcctcagctccttgatgagtttttcaa 317
Query: 1428 acttatgaa 1436
|||||||||
Sbjct: 318 acttatgaa 326
>gnl|LJGI|TC78008 similar to UniRef100_A7Q9N9 Cluster: Chromosome chr5 scaffold_67,
whole genome shotgun sequence; n=2; Vitis vinifera|Rep:
Chromosome chr5 scaffold_67, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (17%)
Length = 677
Score = 119 bits (60), Expect = 6e-26
Identities = 167/202 (82%), Gaps = 3/202 (1%)
Strand = Plus / Plus
Query: 22 ttgcagagtgatgaagacatggtgagggataacattctcatatttatcacccaagttcct 81
|||||||||||| |||| | |||||| || | ||||||| ||| | || |||||||||
Sbjct: 399 ttgcagagtgataaagatgtagtgaggaatcatattctcacgtttgttactcaagttcct 458
Query: 82 cctttattgaggatacaacttggggaatgcctaaaaacaatcataaattctgattatcct 141
||||| |||||| | ||||| || || ||||| |||||| | ||| ||||||||||||||
Sbjct: 459 cctttgttgagggtgcaactcggtgagtgcctgaaaacagttatacattctgattatcct 518
Query: 142 gtaaagtggcctcatcctcttgaatgggtgaagcataacttacggtgtgaagaagaagta 201
| | |||||||||||| |||||| ||||||||||||||||||| | || || ||||
Sbjct: 519 gaacagtggcctcatcttcttgattgggtgaagcataacttacag---gatcaacaagtc 575
Query: 202 tattgtgccttatttgtgctgc 223
||| ||||||||||||||||||
Sbjct: 576 tatggtgccttatttgtgctgc 597
>gnl|LJGI|TC69285 similar to UniRef100_A7Q9N9 Cluster: Chromosome chr5 scaffold_67,
whole genome shotgun sequence; n=2; Vitis vinifera|Rep:
Chromosome chr5 scaffold_67, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (11%)
Length = 586
Score = 85.7 bits (43), Expect = 9e-16
Identities = 76/87 (87%)
Strand = Plus / Plus
Query: 279 tcacattgttgaggaaacatttccccaccttcgatatatatttaacaggcttgtccaaat 338
||||||||||||||| |||||||| ||||||| | ||||| | |||||||||||| ||
Sbjct: 499 tcacattgttgaggagacatttcctcaccttctcaacatattgaccaggcttgtccacat 558
Query: 339 tgttaatccatcacttgaagcagcaga 365
|| ||||||||||||||||| ||||||
Sbjct: 559 tgctaatccatcacttgaagtagcaga 585