Miyakogusa Predicted Gene
- Lj0g3v0313629.2
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0313629.2 Non Chatacterized Hit- tr|K3Z8Y0|K3Z8Y0_SETIT
Uncharacterized protein OS=Setaria italica
GN=Si022879,57.73,4e-19,ZINC FINGER DHHC DOMAIN CONTAINING
PROTEIN,NULL; zf-DHHC,Zinc finger, DHHC-type,
palmitoyltransferas,CUFF.21212.2
(489 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC58395 similar to UniRef100_A7PNP4 Cluster: Chromosome... 571 e-162
gnl|LJGI|TC79605 similar to UniRef100_Q9SR31 Cluster: F3L24.19 p... 357 4e-98
gnl|LJGI|FS343310 weakly similar to UniRef100_A7PI09 Cluster: Ch... 58 5e-08
>gnl|LJGI|TC58395 similar to UniRef100_A7PNP4 Cluster: Chromosome chr8 scaffold_23,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr8 scaffold_23, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (72%)
Length = 774
Score = 571 bits (288), Expect = e-162
Identities = 288/288 (100%)
Strand = Plus / Plus
Query: 1 atggatcaccattgtatttggataaataattgcgttggtcatggaaactataaggtcttc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 487 atggatcaccattgtatttggataaataattgcgttggtcatggaaactataaggtcttc 546
Query: 61 ttcattttcgtcatgtatgctgtaattgcctgcgtctactccctggtcttacttgttggt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 547 ttcattttcgtcatgtatgctgtaattgcctgcgtctactccctggtcttacttgttggt 606
Query: 121 agtctagcttctgatcatattacggatgagaaaaacgatggctctttcagaactgtatat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 607 agtctagcttctgatcatattacggatgagaaaaacgatggctctttcagaactgtatat 666
Query: 181 gttgtttcggggctcttactggtccccttatctatagcattatgtgtgcttttcggatgg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 667 gttgtttcggggctcttactggtccccttatctatagcattatgtgtgcttttcggatgg 726
Query: 241 catatctatctcatccttcacaataagactacaatagagtatcatgaa 288
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 727 catatctatctcatccttcacaataagactacaatagagtatcatgaa 774
>gnl|LJGI|TC79605 similar to UniRef100_Q9SR31 Cluster: F3L24.19 protein; n=1;
Arabidopsis thaliana|Rep: F3L24.19 protein - Arabidopsis
thaliana (Mouse-ear cress), partial (16%)
Length = 686
Score = 357 bits (180), Expect = 4e-98
Identities = 180/180 (100%)
Strand = Plus / Plus
Query: 310 gcagagaagggcgggagtctatataatcatccatatgaccttggtccatatgagaatttg 369
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gcagagaagggcgggagtctatataatcatccatatgaccttggtccatatgagaatttg 60
Query: 370 caatctgttttgggaccaaatatccttagctggctgtggcctacaacagaccatataggt 429
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 caatctgttttgggaccaaatatccttagctggctgtggcctacaacagaccatataggt 120
Query: 430 tctggacttaggttccgcaccatctatgaactcacacaaagtgcatcaacatcaaaatga 489
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 tctggacttaggttccgcaccatctatgaactcacacaaagtgcatcaacatcaaaatga 180
>gnl|LJGI|FS343310 weakly similar to UniRef100_A7PI09 Cluster: Chromosome chr13
scaffold_17, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr13 scaffold_17, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (67%)
Length = 652
Score = 58.0 bits (29), Expect = 5e-08
Identities = 50/57 (87%)
Strand = Plus / Plus
Query: 235 ggatggcatatctatctcatccttcacaataagactacaatagagtatcatgaagga 291
||||||||| |||| || |||||||| |||| ||| |||||||||||| ||||||||
Sbjct: 574 ggatggcatgtctaccttatccttcataatatgacaacaatagagtattatgaagga 630