Miyakogusa Predicted Gene

Lj0g3v0313489.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0313489.1 tr|F1CZQ3|F1CZQ3_9LAMI Superoxide dismutase
OS=Haberlea rhodopensis GN=FSD PE=2
SV=1,54.05,0.00000000000002,seg,NULL; Fe,Mn superoxide dismutase
(SOD), C-terminal domain,Manganese/iron superoxide dismutase,
C,gene.g24438.t1.1
         (258 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC57158 UniRef100_Q53D73 Cluster: Fe-superoxide dismuta...   212   8e-55
gnl|LJGI|TC57161 UniRef100_Q53D71 Cluster: Fe-superoxide dismuta...   101   2e-21

>gnl|LJGI|TC57158 UniRef100_Q53D73 Cluster: Fe-superoxide dismutase 1; n=1; Lotus
           japonicus|Rep: Fe-superoxide dismutase 1 - Lotus
           japonicus, complete
          Length = 1247

 Score =  212 bits (107), Expect = 8e-55
 Identities = 116/119 (97%)
 Strand = Plus / Plus

                                                                       
Query: 37  catgcttactaccttgactatcagaatcggcgccctgattttatatcagtgttcatagat 96
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 747 catgcttactaccttgactatcagaatcggcgccctgattttatatcagtgttcatagat 806

                                                                      
Query: 97  aagcttgtgtcttgggacacagtgagctccagacttgagcaagctaaggctatagttgc 155
           |||||||||||||||||  |||||||||| |||||||||||||||||||||||||||||
Sbjct: 807 aagcttgtgtcttgggaagcagtgagctcaagacttgagcaagctaaggctatagttgc 865



 Score =  109 bits (55), Expect = 8e-24
 Identities = 55/55 (100%)
 Strand = Plus / Plus

                                                                  
Query: 204 atcgacaataagggaaactcctcatgagatatttccagataatgattctgactag 258
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 914 atcgacaataagggaaactcctcatgagatatttccagataatgattctgactag 968


>gnl|LJGI|TC57161 UniRef100_Q53D71 Cluster: Fe-superoxide dismutase 2; n=1; Lotus
           japonicus|Rep: Fe-superoxide dismutase 2 - Lotus
           japonicus, complete
          Length = 1150

 Score =  101 bits (51), Expect = 2e-21
 Identities = 96/111 (86%)
 Strand = Plus / Plus

                                                                       
Query: 37  catgcttactaccttgactatcagaatcggcgccctgattttatatcagtgttcatagat 96
           ||||||||||||||||||| |||||| ||||||||||||| |||||| |||||  | |||
Sbjct: 701 catgcttactaccttgactttcagaaccggcgccctgattatatatcggtgtttgtcgat 760

                                                              
Query: 97  aagcttgtgtcttgggacacagtgagctccagacttgagcaagctaaggct 147
           |||||||| ||||||||  |||  ||||| |||||||| | ||||||||||
Sbjct: 761 aagcttgtttcttgggatgcagcaagctctagacttgaacgagctaaggct 811