Miyakogusa Predicted Gene

Lj0g3v0312999.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0312999.1 Non Chatacterized Hit- tr|I1M1F9|I1M1F9_SOYBN
Uncharacterized protein (Fragment) OS=Glycine max
PE=4,45.38,0.000000000000004, ,CUFF.21129.1
         (364 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|BP038410 weakly similar to UniRef100_A7QEG3 Cluster: Ch...   230   5e-60

>gnl|LJGI|BP038410 weakly similar to UniRef100_A7QEG3 Cluster: Chromosome chr1
           scaffold_84, whole genome shotgun sequence; n=1; Vitis
           vinifera|Rep: Chromosome chr1 scaffold_84, whole genome
           shotgun sequence - Vitis vinifera (Grape), partial (17%)
          Length = 468

 Score =  230 bits (116), Expect = 5e-60
 Identities = 156/168 (92%), Gaps = 1/168 (0%)
 Strand = Plus / Minus

                                                                       
Query: 197 tcctgaagggaatgacttggtctcagcctaattcggtttttgatttgtttacgaagatgt 256
           ||||||||||||||||||||||||     |||||||||||||||||||||||||||||||
Sbjct: 417 tcctgaagggaatgacttggtctcttgg-aattcggtttttgatttgtttacgaagatgt 359

                                                                       
Query: 257 gttggagtgggcttagagctagtgctgccaccgtcttgatccttttgccagcagcctgtg 316
           ||||||||||||||| |||||||||| ||||||||||||||||||||||||||||| |||
Sbjct: 358 gttggagtgggcttatagctagtgcttccaccgtcttgatccttttgccagcagccggtg 299

                                                           
Query: 317 atgcaggggactttgttgttaggaagtccctccatggttactgtatcc 364
           || ||||| ||||||||||| ||||||||||||||||||||| |||||
Sbjct: 298 atacagggaactttgttgttgggaagtccctccatggttactatatcc 251