Miyakogusa Predicted Gene

Lj0g3v0312949.2
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0312949.2 Non Chatacterized Hit- tr|I1JCB2|I1JCB2_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.36099
PE,84.8,0,Acetyl-CoA synthetase-like,NULL; SUBFAMILY NOT NAMED,NULL;
FAMILY NOT NAMED,NULL; no description,NUL,CUFF.21122.2
         (1806 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC70874 similar to UniRef100_A7QPA9 Cluster: Chromosome...    56   8e-07
gnl|LJGI|TC69898 similar to UniRef100_A7QPA9 Cluster: Chromosome...    54   3e-06
gnl|LJGI|TC60740 similar to UniRef100_A7Q8M5 Cluster: Chromosome...    54   3e-06

>gnl|LJGI|TC70874 similar to UniRef100_A7QPA9 Cluster: Chromosome chr18 scaffold_137,
            whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
            Chromosome chr18 scaffold_137, whole genome shotgun
            sequence - Vitis vinifera (Grape), partial (56%)
          Length = 727

 Score = 56.0 bits (28), Expect = 8e-07
 Identities = 58/68 (85%)
 Strand = Plus / Plus

                                                                        
Query: 1706 tgccaaaaacatctactgggaagatacaaaagtatgttctgagggagaaagctagggcct 1765
            ||||||| ||||| ||||| |||| ||| || ||||||||||||||||| || | |||| 
Sbjct: 472  tgccaaagacatcaactggcaagacacagaaatatgttctgagggagaaggcaaaggcca 531

                    
Query: 1766 tgggaagc 1773
            ||||||||
Sbjct: 532  tgggaagc 539


>gnl|LJGI|TC69898 similar to UniRef100_A7QPA9 Cluster: Chromosome chr18 scaffold_137,
            whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
            Chromosome chr18 scaffold_137, whole genome shotgun
            sequence - Vitis vinifera (Grape), partial (69%)
          Length = 939

 Score = 54.0 bits (27), Expect = 3e-06
 Identities = 57/67 (85%)
 Strand = Plus / Plus

                                                                        
Query: 1706 tgccaaaaacatctactgggaagatacaaaagtatgttctgagggagaaagctagggcct 1765
            ||||||| ||||| ||||| |||| ||| || ||||||||||||||||| || | |||| 
Sbjct: 610  tgccaaagacatcaactggcaagacacagaaatatgttctgagggagaaggcaaaggcca 669

                   
Query: 1766 tgggaag 1772
            |||||||
Sbjct: 670  tgggaag 676


>gnl|LJGI|TC60740 similar to UniRef100_A7Q8M5 Cluster: Chromosome chr5 scaffold_64,
            whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
            Chromosome chr5 scaffold_64, whole genome shotgun
            sequence - Vitis vinifera (Grape), complete
          Length = 2379

 Score = 54.0 bits (27), Expect = 3e-06
 Identities = 60/71 (84%)
 Strand = Plus / Plus

                                                                        
Query: 1402 ggggatcttgcagtgaaacaccctgatggctacatagaagtcaaggacagattgaaggac 1461
            ||||||||||| ||||| || || ||||| || |||||| |||| |||||||  ||||||
Sbjct: 1449 ggggatcttgctgtgaagcatccagatggatatatagaaatcaaagacagatcaaaggac 1508

                       
Query: 1462 ataataatctc 1472
            || ||||||||
Sbjct: 1509 atcataatctc 1519