Miyakogusa Predicted Gene
- Lj0g3v0312509.3
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0312509.3 Non Chatacterized Hit- tr|B9S6B4|B9S6B4_RICCO
Ring finger protein, putative OS=Ricinus communis GN=R,67.61,3e-19,
,CUFF.21126.3
(242 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC79540 similar to UniRef100_A7Q7I1 Cluster: Chromosome... 480 e-135
gnl|LJGI|TC78254 weakly similar to UniRef100_A7Q7I1 Cluster: Chr... 228 1e-59
gnl|LJGI|BP077953 similar to UniRef100_A7Q7I1 Cluster: Chromosom... 218 1e-56
gnl|LJGI|TC62019 similar to UniRef100_A7Q7I1 Cluster: Chromosome... 196 4e-50
gnl|LJGI|CB827025 similar to UniRef100_A7Q7I1 Cluster: Chromosom... 52 2e-06
>gnl|LJGI|TC79540 similar to UniRef100_A7Q7I1 Cluster: Chromosome undetermined
scaffold_60, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_60, whole
genome shotgun sequence - Vitis vinifera (Grape),
partial (37%)
Length = 701
Score = 480 bits (242), Expect = e-135
Identities = 242/242 (100%)
Strand = Plus / Plus
Query: 1 atggatgagcatgttaataattcacaggatgctagggaggatgttgatctagacgaactt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 260 atggatgagcatgttaataattcacaggatgctagggaggatgttgatctagacgaactt 319
Query: 61 tcatatgagcagctactagcattgggggaagttgtaggaattgaaagcattggacttcca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 tcatatgagcagctactagcattgggggaagttgtaggaattgaaagcattggacttcca 379
Query: 121 actgatacaatagcatattttccttcagtcaagtacaagaccgggagtgatcaacatgga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 actgatacaatagcatattttccttcagtcaagtacaagaccgggagtgatcaacatgga 439
Query: 181 agcaatgattcgtgtgttatttgtcgggtggggtggactatgaggacggggagtccttga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 agcaatgattcgtgtgttatttgtcgggtggggtggactatgaggacggggagtccttga 499
Query: 241 ca 242
||
Sbjct: 500 ca 501
>gnl|LJGI|TC78254 weakly similar to UniRef100_A7Q7I1 Cluster: Chromosome undetermined
scaffold_60, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_60, whole
genome shotgun sequence - Vitis vinifera (Grape),
partial (25%)
Length = 465
Score = 228 bits (115), Expect = 1e-59
Identities = 178/199 (89%)
Strand = Plus / Plus
Query: 4 gatgagcatgttaataattcacaggatgctagggaggatgttgatctagacgaactttca 63
|||||||||| ||||||||||||||||||| ||| ||||||||||| |||||||||||||
Sbjct: 19 gatgagcatggtaataattcacaggatgcttggggggatgttgatccagacgaactttca 78
Query: 64 tatgagcagctactagcattgggggaagttgtaggaattgaaagcattggacttccaact 123
|||||| |||||||||||||| ||||||| |||||||||||||||| ||||||||||||
Sbjct: 79 tatgaggagctactagcattgtgggaagtggtaggaattgaaagcagaggacttccaact 138
Query: 124 gatacaatagcatattttccttcagtcaagtacaagaccgggagtgatcaacatggaagc 183
|||| || ||||||| ||||||||||| ||| ||||||||| ||||||||| ||||||
Sbjct: 139 aatactattacatatttgccttcagtcaactaccagaccgggaatgatcaacacggaagc 198
Query: 184 aatgattcgtgtgttattt 202
||||||| ||| ||||||
Sbjct: 199 catgattcatgtattattt 217
>gnl|LJGI|BP077953 similar to UniRef100_A7Q7I1 Cluster: Chromosome undetermined
scaffold_60, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_60, whole
genome shotgun sequence - Vitis vinifera (Grape),
partial (22%)
Length = 377
Score = 218 bits (110), Expect = 1e-56
Identities = 149/162 (91%)
Strand = Plus / Minus
Query: 46 gatctagacgaactttcatatgagcagctactagcattgggggaagttgtaggaattgaa 105
||||||||||||||||| |||||| |||||||||||||||||||||| ||||||||||||
Sbjct: 377 gatctagacgaactttcgtatgaggagctactagcattgggggaagtggtaggaattgaa 318
Query: 106 agcattggacttccaactgatacaatagcatattttccttcagtcaagtacaagaccggg 165
|||| |||||||||| |||||| || ||||| || |||||||||||||||||||||| |
Sbjct: 317 agcagaggacttccaattgatactattgcatacttgccttcagtcaagtacaagaccgag 258
Query: 166 agtgatcaacatggaagcaatgattcgtgtgttatttgtcgg 207
| |||||||||||||||||| |||||||||||||||||||||
Sbjct: 257 aatgatcaacatggaagcaacgattcgtgtgttatttgtcgg 216
>gnl|LJGI|TC62019 similar to UniRef100_A7Q7I1 Cluster: Chromosome undetermined
scaffold_60, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_60, whole
genome shotgun sequence - Vitis vinifera (Grape),
partial (73%)
Length = 1388
Score = 196 bits (99), Expect = 4e-50
Identities = 183/211 (86%)
Strand = Plus / Plus
Query: 1 atggatgagcatgttaataattcacaggatgctagggaggatgttgatctagacgaactt 60
||||| ||||||| | |||||||||||||||| ||||||||||||||| ||||||||||
Sbjct: 755 atggaggagcatggtggtaattcacaggatgcttgggaggatgttgatccagacgaactt 814
Query: 61 tcatatgagcagctactagcattgggggaagttgtaggaattgaaagcattggacttcca 120
|| || ||| | |||||||||||||| ||||| || |||| |||||||| || ||| ||
Sbjct: 815 tcctacgaggaactactagcattgggtgaagtagttggaactgaaagcagaggtcttaca 874
Query: 121 actgatacaatagcatattttccttcagtcaagtacaagaccgggagtgatcaacatgga 180
|| ||||| || || | ||| |||||| ||||||||||||| |||| |||||||||||||
Sbjct: 875 acagatactattgcctctttgccttcaatcaagtacaagactgggaatgatcaacatgga 934
Query: 181 agcaatgattcgtgtgttatttgtcgggtgg 211
||| |||||||||||||||||||||||||||
Sbjct: 935 agccatgattcgtgtgttatttgtcgggtgg 965
>gnl|LJGI|CB827025 similar to UniRef100_A7Q7I1 Cluster: Chromosome undetermined
scaffold_60, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_60, whole
genome shotgun sequence - Vitis vinifera (Grape),
partial (20%)
Length = 536
Score = 52.0 bits (26), Expect = 2e-06
Identities = 41/46 (89%)
Strand = Plus / Plus
Query: 1 atggatgagcatgttaataattcacaggatgctagggaggatgttg 46
||||| ||||||| | |||||||||||||||| ||||||||||||
Sbjct: 491 atggaggagcatggtggtaattcacaggatgcttgggaggatgttg 536