Miyakogusa Predicted Gene
- Lj0g3v0312389.2
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0312389.2 Non Chatacterized Hit- tr|I1JWS3|I1JWS3_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.27456
PE,88.55,0,SUBFAMILY NOT NAMED,NULL; FAMILY NOT NAMED,ATPase, P-type,
phospholipid-translocating, flippase; seg,CUFF.21077.2
(1305 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC81733 weakly similar to UniRef100_A7P2Z2 Cluster: Chr... 1065 0.0
gnl|LJGI|TC79902 similar to UniRef100_A7P2Z2 Cluster: Chromosome... 244 1e-63
gnl|LJGI|TC82730 similar to UniRef100_A7PGK8 Cluster: Chromosome... 58 1e-07
>gnl|LJGI|TC81733 weakly similar to UniRef100_A7P2Z2 Cluster: Chromosome chr1
scaffold_5, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr1 scaffold_5, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (15%)
Length = 709
Score = 1065 bits (537), Expect = 0.0
Identities = 566/573 (98%), Gaps = 2/573 (0%)
Strand = Plus / Plus
Query: 734 aggatgtatctgccaggtactgcctcaagtttcctattttatatcaag-aaggggtacaa 792
|||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||
Sbjct: 1 aggatgtatctgccaggtac-gcctcaagtttcctattttatatcaaggaaggggtacaa 59
Query: 793 aatatcctctttagctggcgtcgaatactcagctggatgctcaatggattcatcagtgcc 852
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 60 aatatcctctttagctggcgtcgaatactcagctggatgctcaatggattcatcagtgcc 119
Query: 853 ataataatattcttcttctgcacaaaagcaatggggattcaggcctttgacgaggaggga 912
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 120 ataataatattcttcttctgcacaaaagcaatggggattcaggcctttgacgaggaggga 179
Query: 913 agaaccgccggaaaggacatgttggcggcaaccatgtacacttgcgtggtttgggttgtg 972
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 180 agaaccgccggaaaggacatgttggcggcaaccatgtacacttgcgtggtttgggttgtg 239
Query: 973 aacttgcagatggcactcgccatacggtacttcaccttgattcaacatgttttcatctgg 1032
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 240 aacttgcagatggcactcgccatacggtacttcaccttgattcaacatgtttgcatctgg 299
Query: 1033 ggatccattgctttctggcatctcttcctcttggcatatggagcattgccaccgagcatt 1092
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 300 ggatccattgctttctggcatctcttcctcttggcatatggagcattgccaccgagcatt 359
Query: 1093 tctacaaatgcttacaaagtcttcattgaaactctggctccatctccatccttttggatt 1152
|||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 360 tctacaaatgcttacaaagtcttcattgaaactctggctccatctccatcctttgggatg 419
Query: 1153 gtcacgttctttgtggcgatctcaacgcttataccgtacttctcatgctcaacgattcag 1212
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 420 gtcacgttctttgtggcgatctcaacgcttataccgtacttctcatgctcaacgattcag 479
Query: 1213 atgtggttctttcccatgtaccatgaaatggtacaatggacgaggtacgaggagaagact 1272
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 480 atgtggttctttcccatgtaccatgaaatggtacgatggacgaggtacgaggagaagact 539
Query: 1273 aatggtcctgaattgaatactgtaatacaatga 1305
|||||||||||||||||||||||||||| ||||
Sbjct: 540 aatggtcctgaattgaatactgtaatacgatga 572
>gnl|LJGI|TC79902 similar to UniRef100_A7P2Z2 Cluster: Chromosome chr1 scaffold_5,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr1 scaffold_5, whole genome shotgun sequence
- Vitis vinifera (Grape), partial (29%)
Length = 1142
Score = 244 bits (123), Expect = 1e-63
Identities = 369/451 (81%)
Strand = Plus / Plus
Query: 221 tgataattgatggaaaatcacttgcttatgctcttgaagataatatgaagaacatgtttc 280
|||| |||||||| || || ||| ||||||| ||||||||| || ||||| || ||||||
Sbjct: 677 tgatcattgatgggaagtctcttacttatgcacttgaagatgatgtgaaggacttgtttc 736
Query: 281 tagagcttgcaactcgatgtgcatctgttatctgttgtcgctcatcgccaaaacagaagg 340
| || ||||||| | | |||||||||||||| || ||||| ||||| || || || || |
Sbjct: 737 ttgaacttgcaattggctgtgcatctgttatatgctgtcgttcatctcccaagcaaaaag 796
Query: 341 cactggttactagactggtcaaatctggaactggtaagacaacgttagctattggcgatg 400
|||| ||||| |||||||| || ||||||||| ||||| |||||||||| ||||
Sbjct: 797 cacttgttacaagactggtgaagagcagaactggtagtacaactctagctattggagatg 856
Query: 401 gagctaacgatgtgggaatgcttcaagaagcacatgtaggggttggaatcagtggtgttg 460
| || || ||||| |||||||| ||||||||| | | ||| |||| |||||||||||||
Sbjct: 857 gggcaaatgatgttggaatgctccaagaagcagacattgggattggtatcagtggtgttg 916
Query: 461 aaggaatgcaggctgttatgtctagtgatattgcaattgcgcagttccgatatttagaaa 520
|||||||||||||||||||||| ||||||||||||||||| || || || | | | ||
Sbjct: 917 aaggaatgcaggctgttatgtcaagtgatattgcaattgcccaatttcggtttctggagc 976
Query: 521 gattacttcttgtacacggacactggtgttaccgaaggatgtcatcaatgatatgctact 580
| ||||| || || || ||||| ||||||||| |||| || ||||||||||| |||||||
Sbjct: 977 gcttactactcgtgcatggacattggtgttacagaagaatctcatcaatgatctgctact 1036
Query: 581 ttttctacaagaatatcacatttggcttcactctattcttatatgaggtctatgcatcat 640
| || |||||||||||||| |||||||||||||| ||||| | |||| | ||||| ||||
Sbjct: 1037 tcttttacaagaatatcacctttggcttcactctcttcttctttgagatgtatgcctcat 1096
Query: 641 tctctggacagcctgcgtacaatgattggtt 671
|||| || || |||| |||||||| |||||
Sbjct: 1097 tctcagggcaatctgcatacaatgactggtt 1127
>gnl|LJGI|TC82730 similar to UniRef100_A7PGK8 Cluster: Chromosome chr17 scaffold_16,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr17 scaffold_16, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (40%)
Length = 540
Score = 58.0 bits (29), Expect = 1e-07
Identities = 47/53 (88%)
Strand = Plus / Plus
Query: 758 tcaagtttcctattttatatcaagaaggggtacaaaatatcctctttagctgg 810
|||||||||| | |||||||||||||| || ||||| |||||||||||||||
Sbjct: 93 tcaagtttccattattatatcaagaaggagtgcaaaacatcctctttagctgg 145