Miyakogusa Predicted Gene
- Lj0g3v0312209.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0312209.1 Non Chatacterized Hit- tr|Q5TKD5|Q5TKD5_ORYSJ
Putative uncharacterized protein OSJNBa0017O06.14
OS=O,54.72,0.009,seg,NULL,CUFF.21058.1
(394 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC76164 weakly similar to UniRef100_A7QVP3 Cluster: Chr... 291 2e-78
gnl|LJGI|TC73593 weakly similar to UniRef100_A7PE93 Cluster: Chr... 68 4e-11
gnl|LJGI|DC594685 52 3e-06
gnl|LJGI|BW595103 52 3e-06
>gnl|LJGI|TC76164 weakly similar to UniRef100_A7QVP3 Cluster: Chromosome chr14
scaffold_190, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr14 scaffold_190, whole
genome shotgun sequence - Vitis vinifera (Grape),
partial (75%)
Length = 1039
Score = 291 bits (147), Expect = 2e-78
Identities = 147/147 (100%)
Strand = Plus / Minus
Query: 118 gttgaggacgacgagtgggccgtcgcgggagaagtagaggaagaaccaggcgacgagcag 177
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 426 gttgaggacgacgagtgggccgtcgcgggagaagtagaggaagaaccaggcgacgagcag 367
Query: 178 gatcaggaagacgatcatggagacggggtgccacagcagggtgaggaagatgatcaggag 237
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 366 gatcaggaagacgatcatggagacggggtgccacagcagggtgaggaagatgatcaggag 307
Query: 238 ggaaacggcggcgtagttgaagcggaa 264
|||||||||||||||||||||||||||
Sbjct: 306 ggaaacggcggcgtagttgaagcggaa 280
Score = 234 bits (118), Expect = 3e-61
Identities = 118/118 (100%)
Strand = Plus / Minus
Query: 1 atgaaacaagtcctcaatgacccgaaacgccgcatgcaacccaacaacgaccacgcacac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 588 atgaaacaagtcctcaatgacccgaaacgccgcatgcaacccaacaacgaccacgcacac 529
Query: 61 gatcagcgccaccagcacattgagccccacgtgggtccacacaagcccgacgacggtg 118
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 528 gatcagcgccaccagcacattgagccccacgtgggtccacacaagcccgacgacggtg 471
>gnl|LJGI|TC73593 weakly similar to UniRef100_A7PE93 Cluster: Chromosome chr11
scaffold_13, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr11 scaffold_13, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (57%)
Length = 493
Score = 67.9 bits (34), Expect = 4e-11
Identities = 76/90 (84%)
Strand = Plus / Minus
Query: 121 gaggacgacgagtgggccgtcgcgggagaagtagaggaagaaccaggcgacgagcaggat 180
|||||| |||| |||| ||||||| ||||| |||||||||||||||||| || | |
Sbjct: 402 gaggacaacgacagggcggtcgcggaagaagaagaggaagaaccaggcgaggaagacggc 343
Query: 181 caggaagacgatcatggagacggggtgcca 210
||||||||||| |||||||||||||||||
Sbjct: 342 gaggaagacgatgatggagacggggtgcca 313
>gnl|LJGI|DC594685
Length = 555
Score = 52.0 bits (26), Expect = 3e-06
Identities = 41/46 (89%)
Strand = Plus / Minus
Query: 147 agaagtagaggaagaaccaggcgacgagcaggatcaggaagacgat 192
||||||||||||||||||||| ||| ||| || ||||||||||||
Sbjct: 461 agaagtagaggaagaaccaggggacaagcgcgaccaggaagacgat 416
>gnl|LJGI|BW595103
Length = 486
Score = 52.0 bits (26), Expect = 3e-06
Identities = 26/26 (100%)
Strand = Plus / Minus
Query: 93 gggtccacacaagcccgacgacggtg 118
||||||||||||||||||||||||||
Sbjct: 486 gggtccacacaagcccgacgacggtg 461