Miyakogusa Predicted Gene

Lj0g3v0312029.1

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0312029.1 Non Chatacterized Hit- tr|I1MI74|I1MI74_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.57825
PE,87.18,0,seg,NULL; Pro_isomerase,Cyclophilin-like peptidyl-prolyl
cis-trans isomerase domain; RRM_1,RNA recog,CUFF.21055.1
         (711 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|AV415981 homologue to UniRef100_A7QD90 Cluster: Peptidy...   488   e-137
gnl|LJGI|BW599077 similar to UniRef100_A7QD90 Cluster: Peptidyl-...   398   e-110
gnl|LJGI|BW625918 similar to UniRef100_Q93YQ8 Cluster: Peptidyl-...   196   1e-49

>gnl|LJGI|AV415981 homologue to UniRef100_A7QD90 Cluster: Peptidyl-prolyl cis-trans
           isomerase; n=1; Vitis vinifera|Rep: Peptidyl-prolyl
           cis-trans isomerase - Vitis vinifera (Grape), partial
           (17%)
          Length = 333

 Score =  488 bits (246), Expect = e-137
 Identities = 285/298 (95%)
 Strand = Plus / Plus

                                                                       
Query: 389 ttgtacttgaaagtattggggatattcctgatgctgatattaagcctccagacaatgtac 448
           |||||||||| |||||||| ||||||||||||||||| ||||||||||||||||||||||
Sbjct: 1   ttgtacttgagagtattggtgatattcctgatgctgagattaagcctccagacaatgtac 60

                                                                       
Query: 449 tattcatctgtaaattgaacccggttactgaggatgcggacttgcatacaatattttcac 508
           ||||  |||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 61  tatttgtctgtaaattgaacccggttactgaggatgaggacttgcatacaatattttcac 120

                                                                       
Query: 509 aatttggaactgtgtcatcggctgaaatcatccgtgatcagaagactggtgacagtctat 568
             ||||||||||||||||||||||| |||||||||||||| ||||||||||||||| |||
Sbjct: 121 gctttggaactgtgtcatcggctgacatcatccgtgatcaaaagactggtgacagtttat 180

                                                                       
Query: 569 gctatgctttcatagagtttgaagacaaacaggcttgtgagcaggcatattttaagatgg 628
           |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 181 gctatgctttcatagagtttgaggacaaacaggcttgtgagcaggcatattttaagatgg 240

                                                                     
Query: 629 acaatgctttgattgatgatcgaaggatacatgtggattttagtcaaagtgtgtcaaa 686
           | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 ataatgctttgattgatgatcgaaggatacatgtggattttagtcaaagtgtgtcaaa 298


>gnl|LJGI|BW599077 similar to UniRef100_A7QD90 Cluster: Peptidyl-prolyl cis-trans
           isomerase; n=1; Vitis vinifera|Rep: Peptidyl-prolyl
           cis-trans isomerase - Vitis vinifera (Grape), partial
           (18%)
          Length = 482

 Score =  398 bits (201), Expect = e-110
 Identities = 282/309 (91%)
 Strand = Plus / Plus

                                                                       
Query: 48  tctgcgtgatgaccttgattaccttgacggaaagcacactgtttttggtgaggtagttga 107
           |||||| |||||||||||||||||||| || |||||||| |||||||||||||||| |||
Sbjct: 174 tctgcgggatgaccttgattaccttgatgggaagcacacagtttttggtgaggtagctga 233

                                                                       
Query: 108 aggatttgaagttttgactagaataaatgaggcttatgtggatgagaagagcagaccata 167
           |||||||||   ||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 234 aggatttgagactttgactagaataaatgaggcatatgtggatgagaagagcagaccata 293

                                                                       
Query: 168 taaaaatataagaatcatgcacacatacatcttggatgatccttttgttgatcctcctga 227
           ||||||||||||||||| ||||||||||||| |||| |||||||||| |||||||||| |
Sbjct: 294 taaaaatataagaatcaagcacacatacatcctggaggatccttttgatgatcctcctca 353

                                                                       
Query: 228 gctaactgagttcattcctgatgcttcaccagaagggaagtgtaaagaagaggttgatga 287
           |||| | ||  |||||||||  |||||||||||||| ||   |||||| |||||||||||
Sbjct: 354 gctagccgacctcattcctggagcttcaccagaaggaaaacctaaagaggaggttgatga 413

                                                                       
Query: 288 tgatgtgcgacttgaagatgattgggttcccatggatgaacaattaaatccagcagagct 347
           ||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||
Sbjct: 414 tgatgtgcgacttgaagatgattgggtgcccatggatgaacaattaaacccagcagagct 473

                    
Query: 348 tgaggaggt 356
           |||||||||
Sbjct: 474 tgaggaggt 482


>gnl|LJGI|BW625918 similar to UniRef100_Q93YQ8 Cluster: Peptidyl-prolyl cis-trans
           isomerase; n=1; Arabidopsis thaliana|Rep:
           Peptidyl-prolyl cis-trans isomerase - Arabidopsis
           thaliana (Mouse-ear cress), partial (32%)
          Length = 479

 Score =  196 bits (99), Expect = 1e-49
 Identities = 138/151 (91%)
 Strand = Plus / Plus

                                                                       
Query: 1   atggcaagtgcaggacagaatctcaatgcttcacagttttatatcactctgcgtgatgac 60
           ||||||||||||||| ||||||| |||||||||||||||||| ||| |||||| ||||||
Sbjct: 329 atggcaagtgcaggagagaatctgaatgcttcacagttttatttcagtctgcgggatgac 388

                                                                       
Query: 61  cttgattaccttgacggaaagcacactgtttttggtgaggtagttgaaggatttgaagtt 120
           |||||||||||||| || |||||||| |||||||||||||||| ||||||||||||   |
Sbjct: 389 cttgattaccttgatgggaagcacacagtttttggtgaggtagctgaaggatttgagact 448

                                          
Query: 121 ttgactagaataaatgaggcttatgtggatg 151
           |||||||||||||||||||| ||||||||||
Sbjct: 449 ttgactagaataaatgaggcatatgtggatg 479