Miyakogusa Predicted Gene
- Lj0g3v0311969.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0311969.1 Non Chatacterized Hit- tr|C6T4T9|C6T4T9_SOYBN
Putative uncharacterized protein OS=Glycine max PE=4
S,44.09,0.000002,seg,NULL,CUFF.21049.1
(279 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|GO012637 homologue to UniRef100_Q0JPC0 Cluster: Os01g02... 315 8e-86
gnl|LJGI|TC75758 129 1e-29
>gnl|LJGI|GO012637 homologue to UniRef100_Q0JPC0 Cluster: Os01g0230800 protein; n=1;
Oryza sativa Japonica Group|Rep: Os01g0230800 protein -
Oryza, partial (10%)
Length = 563
Score = 315 bits (159), Expect = 8e-86
Identities = 162/163 (99%)
Strand = Plus / Plus
Query: 117 agcttcaaatgatgaaattggtgtgagcagtaggagattactttggcaaccacggcgacc 176
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 350 agcttcaaatgatgaaattggtgtgagcagtaggagattactttggcaaccaccgcgacc 409
Query: 177 tccaccaccgcgacctccatgttcgaggggaagaatagcttatgctgtgagtcctgtaaa 236
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 410 tccaccaccgcgacctccatgttcgaggggaagaatagcttatgctgtgagtcctgtaaa 469
Query: 237 aagccatgcagaaaatgatccacgttgccacaactatctatga 279
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 470 aagccatgcagaaaatgatccacgttgccacaactatctatga 512
Score = 226 bits (114), Expect = 6e-59
Identities = 117/118 (99%)
Strand = Plus / Plus
Query: 1 atggcttctaagaggtgctcgcttatttgggtggttctctttctttgtgtgttatgtttt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 22 atggcttctaagaggtgctcgcttatttgggtggttctctttctttgtgtgttatgtttt 81
Query: 61 tctgctaaggcaacagcaaggaacattaatgctgcaggtgcttctgaactttacccag 118
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 82 tctgctgaggcaacagcaaggaacattaatgctgcaggtgcttctgaactttacccag 139
>gnl|LJGI|TC75758
Length = 419
Score = 129 bits (65), Expect = 1e-29
Identities = 109/123 (88%), Gaps = 3/123 (2%)
Strand = Plus / Plus
Query: 1 atggcttctaagaggtgctcgcttatttgggtggttctctttctttgtgtgttatgtttt 60
||||||||||||| ||||||||| ||||||||| |||||||||||| |||||| |||||
Sbjct: 25 atggcttctaagaagtgctcgctgatttgggtgcttctctttctttctgtgttgagtttt 84
Query: 61 tctgctaaggcaacagcaagga---acattaatgctgcaggtgcttctgaactttaccca 117
||||| ||||||||| |||| | |||| ||||||||||||||||||||||||||| ||
Sbjct: 85 tctgccaaggcaacaacaagaaattacatcaatgctgcaggtgcttctgaactttacgca 144
Query: 118 gct 120
|||
Sbjct: 145 gct 147
Score = 89.7 bits (45), Expect = 8e-18
Identities = 45/45 (100%)
Strand = Plus / Plus
Query: 186 gcgacctccatgttcgaggggaagaatagcttatgctgtgagtcc 230
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 gcgacctccatgttcgaggggaagaatagcttatgctgtgagtcc 245