Miyakogusa Predicted Gene
- Lj0g3v0311789.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0311789.1 Non Chatacterized Hit- tr|I1LM16|I1LM16_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.47776
PE,78.25,0,Multidrug resistance efflux transporter EmrE,NULL;
seg,NULL; EamA,Drug/metabolite transporter,CUFF.21041.1
(1173 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC57884 similar to UniRef100_A7PTL0 Cluster: Chromosome... 1766 0.0
gnl|LJGI|FS350118 similar to UniRef100_A7PTL0 Cluster: Chromosom... 539 e-152
gnl|LJGI|TC68843 weakly similar to UniRef100_A7Q3D0 Cluster: Chr... 109 4e-23
gnl|LJGI|FS355542 similar to UniRef100_A7PTL0 Cluster: Chromosom... 68 1e-10
>gnl|LJGI|TC57884 similar to UniRef100_A7PTL0 Cluster: Chromosome undetermined
scaffold_30, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_30, whole
genome shotgun sequence - Vitis vinifera (Grape),
partial (61%)
Length = 1454
Score = 1766 bits (891), Expect = 0.0
Identities = 891/891 (100%)
Strand = Plus / Plus
Query: 1 atggcgtcgtggtggtgctcctccctctccgccaccgtctccgtcacaacaaccaccgcc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 36 atggcgtcgtggtggtgctcctccctctccgccaccgtctccgtcacaacaaccaccgcc 95
Query: 61 accaccaccacccgccgctatcctctaatctctcacacttcccaattccacaccaaccca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 96 accaccaccacccgccgctatcctctaatctctcacacttcccaattccacaccaaccca 155
Query: 121 ttcccaccttctcccccatcctcgctccgattcaggcttccatgctccaacaaatccacc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 156 ttcccaccttctcccccatcctcgctccgattcaggcttccatgctccaacaaatccacc 215
Query: 181 gtaaaagccagcaaaccacccccctccggcaccgacgtggattgcgtcggaacagggcaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 216 gtaaaagccagcaaaccacccccctccggcaccgacgtggattgcgtcggaacagggcaa 275
Query: 241 aacgcggagtgcaccgtcaacttggaacaacaagacggaagcgcaaagcaagaagatgag 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 276 aacgcggagtgcaccgtcaacttggaacaacaagacggaagcgcaaagcaagaagatgag 335
Query: 301 tcatcgccggcgacgatgctgtgtctcgcggaagggctttgggaattggcggtgctggtg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 336 tcatcgccggcgacgatgctgtgtctcgcggaagggctttgggaattggcggtgctggtg 395
Query: 361 tcgccgttcttcttctggggtaccgccatggtggccatgaaggaggtgcttccgaagtgc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 396 tcgccgttcttcttctggggtaccgccatggtggccatgaaggaggtgcttccgaagtgc 455
Query: 421 ggcccgttcttcgtttcggcgtttcgtctcatccctgcagggttccttcttgttggcttt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 456 ggcccgttcttcgtttcggcgtttcgtctcatccctgcagggttccttcttgttggcttt 515
Query: 481 gcagcttctagaggcaggcctttaccctctggtttcaatgcttgggtttccatctcgctc 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 516 gcagcttctagaggcaggcctttaccctctggtttcaatgcttgggtttccatctcgctc 575
Query: 541 ttcgctctcgttgatgctacttgctttcagggttttctagcagaagggttgcagaagact 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 576 ttcgctctcgttgatgctacttgctttcagggttttctagcagaagggttgcagaagact 635
Query: 601 tcagctggtttgggcagcgttataattgattcacagcctttgacagtggctgtacttgca 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 636 tcagctggtttgggcagcgttataattgattcacagcctttgacagtggctgtacttgca 695
Query: 661 gttttgttatttggtgagtcaattggagttattggagctgctgggcttgttcttggtgtc 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 696 gttttgttatttggtgagtcaattggagttattggagctgctgggcttgttcttggtgtc 755
Query: 721 gtaggacttgtgctgctcgagttacccgccctatcatttgatgaaagcaacttctcattg 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 756 gtaggacttgtgctgctcgagttacccgccctatcatttgatgaaagcaacttctcattg 815
Query: 781 tggggaagtggggagtggtggatgcttcttgcagctcagagtatggcagttggtacggtc 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 816 tggggaagtggggagtggtggatgcttcttgcagctcagagtatggcagttggtacggtc 875
Query: 841 atggttcggtgggtctctaagtactctgatcctatcatggctactggatgg 891
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 876 atggttcggtgggtctctaagtactctgatcctatcatggctactggatgg 926
Score = 226 bits (114), Expect = 2e-58
Identities = 114/114 (100%)
Strand = Plus / Plus
Query: 1060 ggtagcttgactaagctcagttcactgacatttttgacaccaatgttcgcttcaattttt 1119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 926 ggtagcttgactaagctcagttcactgacatttttgacaccaatgttcgcttcaattttt 985
Query: 1120 gggtttctatatcttggtgagaccttctcaccaatacaactagttggggccact 1173
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 986 gggtttctatatcttggtgagaccttctcaccaatacaactagttggggccact 1039
>gnl|LJGI|FS350118 similar to UniRef100_A7PTL0 Cluster: Chromosome undetermined
scaffold_30, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_30, whole
genome shotgun sequence - Vitis vinifera (Grape), partial
(25%)
Length = 721
Score = 539 bits (272), Expect = e-152
Identities = 272/272 (100%)
Strand = Plus / Minus
Query: 902 ttggtggtctccctcttgtggcattagcaatttttaacaatgatcctgctgtaagtggga 961
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 ttggtggtctccctcttgtggcattagcaatttttaacaatgatcctgctgtaagtggga 662
Query: 962 ctcttgagtacagctcaagtgatatattggcactcctctacacgtccatttttggaagcg 1021
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 ctcttgagtacagctcaagtgatatattggcactcctctacacgtccatttttggaagcg 602
Query: 1022 ctgttagctatggtgtgttcttttacagtgcaacaaaaggtagcttgactaagctcagtt 1081
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 ctgttagctatggtgtgttcttttacagtgcaacaaaaggtagcttgactaagctcagtt 542
Query: 1082 cactgacatttttgacaccaatgttcgcttcaatttttgggtttctatatcttggtgaga 1141
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 cactgacatttttgacaccaatgttcgcttcaatttttgggtttctatatcttggtgaga 482
Query: 1142 ccttctcaccaatacaactagttggggccact 1173
||||||||||||||||||||||||||||||||
Sbjct: 481 ccttctcaccaatacaactagttggggccact 450
>gnl|LJGI|TC68843 weakly similar to UniRef100_A7Q3D0 Cluster: Chromosome chr13
scaffold_48, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr13 scaffold_48, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (13%)
Length = 894
Score = 109 bits (55), Expect = 4e-23
Identities = 92/103 (89%), Gaps = 1/103 (0%)
Strand = Plus / Plus
Query: 619 gttataattgattcacagcctttgacagtggctgtacttg-cagttttgttatttggtga 677
||||||||||||||| |||||| ||||||||||||||||| ||| |||||||||||||||
Sbjct: 318 gttataattgattcatagccttcgacagtggctgtacttgccagctttgttatttggtga 377
Query: 678 gtcaattggagttattggagctgctgggcttgttcttggtgtc 720
| || || ||||| |||||| |||||||||||| ||| |||||
Sbjct: 378 gccagttagagtttttggagttgctgggcttgtactttgtgtc 420
>gnl|LJGI|FS355542 similar to UniRef100_A7PTL0 Cluster: Chromosome undetermined
scaffold_30, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_30, whole
genome shotgun sequence - Vitis vinifera (Grape),
partial (5%)
Length = 450
Score = 67.9 bits (34), Expect = 1e-10
Identities = 52/58 (89%)
Strand = Plus / Minus
Query: 619 gttataattgattcacagcctttgacagtggctgtacttgcagttttgttatttggtg 676
||||||||||||||||| ||||| | || |||| ||||||||| ||||||||||||||
Sbjct: 296 gttataattgattcacatcctttaataggggctttacttgcagctttgttatttggtg 239