Miyakogusa Predicted Gene
- Lj0g3v0311479.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0311479.1 Non Chatacterized Hit- tr|I1MB79|I1MB79_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,76.03,0,B-Box-type
zinc finger,Zinc finger, B-box; zf-B_box,Zinc finger, B-box;
ZF_BBOX,Zinc finger, B-box; ,CUFF.21022.1
(723 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC81600 similar to UniRef100_A7Q2W9 Cluster: Chromosome... 206 1e-52
>gnl|LJGI|TC81600 similar to UniRef100_A7Q2W9 Cluster: Chromosome chr12 scaffold_47,
whole genome shotgun sequence; n=2; Vitis vinifera|Rep:
Chromosome chr12 scaffold_47, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (53%)
Length = 1341
Score = 206 bits (104), Expect = 1e-52
Identities = 466/584 (79%), Gaps = 7/584 (1%)
Strand = Plus / Plus
Query: 1 atgggttatatgtgtgatttttgtggggaccagaggtccatggtgtactgccgctctgac 60
||||||||| | |||||||||||||| || ||||||||| ||||||||||||||| ||
Sbjct: 225 atgggttatttatgtgatttttgtggagagcagaggtcctcggtgtactgccgctcggat 284
Query: 61 gctgcgtgcttatgcttgtcatgcgatcgaaatgttcattccgcgaacgccctttcaagg 120
| |||||| |||||| ||||||||||||| ||||||||||| || ||||||||||| | |
Sbjct: 285 gttgcgtgtttatgcctgtcatgcgatcggaatgttcattctgctaacgccctttctaag 344
Query: 121 cggcattcaaggacccttttatgtgagagatgcaattcacaacctgcctttgtaaggtgc 180
|| || | || |||||| |||| ||||| || |||||||||||||| | ||| |||||
Sbjct: 345 cgtcacgcgagaacccttgtatgcgagaggtgtaattcacaacctgcatatgtgaggtgt 404
Query: 181 actgaagagaaagtttcactttgtcagaattgtgactgggtgggtcacggtgcctctaca 240
|||| ||||||||||| ||||||||||| ||||| ||| || ||| |||||| || |
Sbjct: 405 gctgatgagaaagtttcgctttgtcagaactgtgattggttgtctcatggtgccgctccg 464
Query: 241 tcttc---aacacataagagg-caaccaatcaattgctactctggatgccccgcagcatc 296
||||| |||||| |||||| ||| ||||||||||||||||||| ||||| |||| |
Sbjct: 465 tcttcttcaacacacaagagggcaatcaatcaattgctactctggctgcccttcagctgc 524
Query: 297 tgagctatcttctatatggtcatttgtggatgatatcccttctatgagcgactctacatg 356
| || ||||| || ||||||||| | ||||| |||||||| | || | ||
Sbjct: 525 aaaactttcttcaatgtggtcatttttctcggatattccttctattggtgaagcg---tg 581
Query: 357 tgagcaagaacttggtttgatgagtattaatgagaaccgtggcgagaatggttgggttcc 416
|||| | ||||||||||| ||||| || ||||||||| || | ||| || |||||||||
Sbjct: 582 tgagaaggaacttggtttaatgagcataaatgagaacactgacaagagtgcttgggttcc 641
Query: 417 tccagaaaaccagaatgtgtctggttcagatcaaggtactgatttacctggttcggataa 476
|||||||| | |||||||||||||||||| ||||| ||||||||||| ||| ||
Sbjct: 642 tccagaaagcgagaatgtgtctggttcagctcaagtgactgatttacccaacaaggacaa 701
Query: 477 gcgctggattggtacatcttcaaagcctgagttaagctctgaacctcgtgttcaggacca 536
||| |||||||||||||| || |||| |||||| ||||||||||||| ||| ||
Sbjct: 702 atcttgggttggtacatcttcagcacccgagtcaagctcagaacctcgtgttctggaaca 761
Query: 537 gccagctggaccttcaaatgaatatctgccaaagttatactgtc 580
|| |||||||| | ||||||| | |||| |||||| ||||||
Sbjct: 762 agcacctggacctgccaatgaatgtatgcccaagttacactgtc 805
Score = 65.9 bits (33), Expect = 3e-10
Identities = 57/65 (87%)
Strand = Plus / Plus
Query: 659 ttgagaactacgaagaactttttggtatggccctcactcattctgaatcgcttttcgaaa 718
|||||||||| || ||||||||||||||||| ||| |||||||||| |||||| ||||
Sbjct: 932 ttgagaactatgaggaactttttggtatggctctctgtcattctgaagagctttttgaaa 991
Query: 719 atggt 723
|||||
Sbjct: 992 atggt 996