Miyakogusa Predicted Gene

Lj0g3v0311329.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0311329.1 Non Chatacterized Hit- tr|F6HVK5|F6HVK5_VITVI
Putative uncharacterized protein OS=Vitis vinifera GN=,83.1,3e-19,no
description,Pre-ATP-grasp fold; PHOSPHORIBOSYLAMINOIMIDAZOLE
CARBOXYLASE ATPASE-SUBUNIT,NULL; Pre,gene.g24274.t1.1
         (354 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC68403 similar to UniRef100_Q8W197 Cluster: Aminoimida...   335   1e-91

>gnl|LJGI|TC68403 similar to UniRef100_Q8W197 Cluster: Aminoimidazole ribonucleotide
           carboxylase; n=1; Vigna unguiculata|Rep: Aminoimidazole
           ribonucleotide carboxylase - Vigna unguiculata (Cowpea),
           partial (29%)
          Length = 942

 Score =  335 bits (169), Expect = 1e-91
 Identities = 205/217 (94%)
 Strand = Plus / Plus

                                                                       
Query: 131 gcaatgatgaggtacctgttcatggactgtctgaagcggttgttggggttctgggaggag 190
           ||||||||||||| ||||||||||||||||||||  |  ||||||| |||||||||||||
Sbjct: 504 gcaatgatgaggtgcctgttcatggactgtctgagacaattgttggtgttctgggaggag 563

                                                                       
Query: 191 gtcaactgggtcgcatgctttgtcaagctgcttctaagatggcaattaaagttatggttt 250
           ||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||
Sbjct: 564 gtcaactgggtcgcatgctttgtcaagctgcttctaaaatggcaattaaagtcatggttt 623

                                                                       
Query: 251 tggatccacaggagaactgcccagcgagttcgctttcttatcagcatagggttggaagct 310
           ||||||| ||||||||||||||||||||||||||||||||||| |||| |||||||||||
Sbjct: 624 tggatccgcaggagaactgcccagcgagttcgctttcttatcatcatatggttggaagct 683

                                                
Query: 311 ttgatgacagtgctactgtggaggaattcgcaaagag 347
           |||||||||||||||| ||||||||||||||||||||
Sbjct: 684 ttgatgacagtgctacggtggaggaattcgcaaagag 720



 Score =  151 bits (76), Expect = 3e-36
 Identities = 97/104 (93%)
 Strand = Plus / Plus

                                                                       
Query: 1   atggaccaaccacctcacctttcatcttctttgaagctgaagcagtgtcgccaccctcac 60
           ||||| ||||||||||  ||||||||||||||||||||||||||||| |||||||| |||
Sbjct: 401 atggagcaaccacctcctctttcatcttctttgaagctgaagcagtgccgccacccccac 460

                                                       
Query: 61  ctcactattcaagcatcaaaccagcagggtgcagtttcctcaag 104
           |||||||||||||||||||||||||| |||||||| ||||||||
Sbjct: 461 ctcactattcaagcatcaaaccagcatggtgcagtctcctcaag 504