Miyakogusa Predicted Gene
- Lj0g3v0311279.3
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0311279.3 Non Chatacterized Hit- tr|I1NH07|I1NH07_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.49753
PE,86.75,0,RCC1-LIKE DOMAIN PROTEIN 3, HECT DOMAIN,NULL; REGULATOR OF
CHROMOSOME CONDENSATION,NULL; no descript,CUFF.21059.3
(2472 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|FS324848 similar to UniRef100_A7QMY3 Cluster: Chromosom... 1203 0.0
gnl|LJGI|TC72865 homologue to UniRef100_A7QMY3 Cluster: Chromoso... 422 e-117
gnl|LJGI|BP053036 homologue to UniRef100_A7QMY2 Cluster: Chromos... 335 8e-91
gnl|LJGI|TC81682 similar to UniRef100_A7PQZ5 Cluster: Chromosome... 98 3e-19
>gnl|LJGI|FS324848 similar to UniRef100_A7QMY3 Cluster: Chromosome undetermined
scaffold_129, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_129,
whole genome shotgun sequence - Vitis vinifera (Grape),
partial (96%)
Length = 737
Score = 1203 bits (607), Expect = 0.0
Identities = 607/607 (100%)
Strand = Plus / Plus
Query: 1 atggcagatcttgctagatacgggaatgccaaccgtgacattcaacaagcactaattgcc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 131 atggcagatcttgctagatacgggaatgccaaccgtgacattcaacaagcactaattgcc 190
Query: 61 ttgaaaaagggtgctcaactgcttaaatatggtcgtaagggaaagcccaagttttgccca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 191 ttgaaaaagggtgctcaactgcttaaatatggtcgtaagggaaagcccaagttttgccca 250
Query: 121 tttagactttccaatgatggatcaactttaatctggatttcaagtagtggagaaagaaat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 251 tttagactttccaatgatggatcaactttaatctggatttcaagtagtggagaaagaaat 310
Query: 181 ctgaagctatcttctgtctcaagaattattcctggacaaagaactgctgttttcaaacgt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 311 ctgaagctatcttctgtctcaagaattattcctggacaaagaactgctgttttcaaacgt 370
Query: 241 tacttgcgtcctgaaaaggagtatttgtccttttcacttatttatgatagcggaaagcta 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 371 tacttgcgtcctgaaaaggagtatttgtccttttcacttatttatgatagcggaaagcta 430
Query: 301 tcccttgacctgatttgcaaagataaagttgaggcagaagcgtggatttctggtctcaaa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 431 tcccttgacctgatttgcaaagataaagttgaggcagaagcgtggatttctggtctcaaa 490
Query: 361 tcactgatctcttctggccaaggtggtcggtccaaaattgatggatggagtgatgagggc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 491 tcactgatctcttctggccaaggtggtcggtccaaaattgatggatggagtgatgagggc 550
Query: 421 ctcaatcttgatgatagcagagatttaacatcaaatagtccaagcgacagttcagctagt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 551 ctcaatcttgatgatagcagagatttaacatcaaatagtccaagcgacagttcagctagt 610
Query: 481 gcgtcacgagacattagttctcctgacgttcctgcgagtcttccaaatacctcaccaaag 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 611 gcgtcacgagacattagttctcctgacgttcctgcgagtcttccaaatacctcaccaaag 670
Query: 541 tccttttggcctgacaatattgtaaattctgaaaggtcacatgcaccatcagactcaaca 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 671 tccttttggcctgacaatattgtaaattctgaaaggtcacatgcaccatcagactcaaca 730
Query: 601 aatatgc 607
|||||||
Sbjct: 731 aatatgc 737
>gnl|LJGI|TC72865 homologue to UniRef100_A7QMY3 Cluster: Chromosome undetermined
scaffold_129, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_129,
whole genome shotgun sequence - Vitis vinifera (Grape),
partial (86%)
Length = 1058
Score = 422 bits (213), Expect = e-117
Identities = 378/433 (87%)
Strand = Plus / Plus
Query: 55 attgccttgaaaaagggtgctcaactgcttaaatatggtcgtaagggaaagcccaagttt 114
||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 495 attgctttgaaaaagggtgctcaactgcttaaatatggtcgtaagggaaagcctaagttt 554
Query: 115 tgcccatttagactttccaatgatggatcaactttaatctggatttcaagtagtggagaa 174
||||||||||||||||||| ||||| || |||||||||||||||||||||||||||||
Sbjct: 555 tgcccatttagactttccagtgatgaattgtctttaatctggatttcaagtagtggagaa 614
Query: 175 agaaatctgaagctatcttctgtctcaagaattattcctggacaaagaactgctgttttc 234
| || ||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 615 aaaagtctgaagctatcttcgatctcaagaattattcctggacaaagaactgctgttttc 674
Query: 235 aaacgttacttgcgtcctgaaaaggagtatttgtccttttcacttatttatgatagcgga 294
|||| || |||||||||| ||||| |||||||||||||||||||||||| | |||
Sbjct: 675 caacgatatctgcgtcctgagaaggactatttgtccttttcacttatttataaccacggg 734
Query: 295 aagctatcccttgacctgatttgcaaagataaagttgaggcagaagcgtggatttctggt 354
|||| ||||||||| |||||||||| ||||| ||| |||||||| ||||||| |||||
Sbjct: 735 aagcgatcccttgatttgatttgcaaggataaggttcaggcagaattgtggattactggt 794
Query: 355 ctcaaatcactgatctcttctggccaaggtggtcggtccaaaattgatggatggagtgat 414
||||| ||||||| |||||||| |||||||| || |||||||| |||||||||||||||
Sbjct: 795 ctcaaggcactgatttcttctggtcaaggtgggcgttccaaaatagatggatggagtgat 854
Query: 415 gagggcctcaatcttgatgatagcagagatttaacatcaaatagtccaagcgacagttca 474
| ||||| |||||||||||| | ||| || ||||| | |||||| || || |||||
Sbjct: 855 ggaggcctatgtcttgatgatagtaaagacttgacatcgagtagtcctagtgaaagttcg 914
Query: 475 gctagtgcgtcac 487
| |||||| ||||
Sbjct: 915 gttagtgcttcac 927
>gnl|LJGI|BP053036 homologue to UniRef100_A7QMY2 Cluster: Chromosome undetermined
scaffold_129, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_129, whole
genome shotgun sequence - Vitis vinifera (Grape), partial
(15%)
Length = 456
Score = 335 bits (169), Expect = 8e-91
Identities = 374/437 (85%), Gaps = 4/437 (0%)
Strand = Plus / Plus
Query: 991 actgttgattttgttgcctgtggggagttccattcctgtgctgttacagtggccggtgaa 1050
|||||||| |||||||||||||||||||||||| | |||||||||||| |||| || |||
Sbjct: 11 actgttgactttgttgcctgtggggagttccatacatgtgctgttacaatggctggggaa 70
Query: 1051 ctatatacatggggggatggtactcatcatgctgggctgcttggtcatggaactgatgtt 1110
|| | ||||||||| |||||||||||| | ||||| || |||||||||||||||||||||
Sbjct: 71 ctctttacatggggtgatggtactcataaagctggacttcttggtcatggaactgatgtt 130
Query: 1111 agtcattggataccaaagagaattgccggtccattagagggacttcaaattgcatctgtt 1170
|||||||||||||||||||||||||| |||||||||||||| |||||| |||| | ||
Sbjct: 131 agtcattggataccaaagagaattgctggtccattagaggggcttcaagttgctttagtc 190
Query: 1171 gcctgtggtccgt-ggcacac-tgccttgataactttaagtgggcagctctttacatttg 1228
| |||||||| | ||||||| || |||||||||| || ||||||||||| ||||| |
Sbjct: 191 acttgtggtccatgggcacacaagctttgataacttcaaccgggcagctcttcacattcg 250
Query: 1229 gtgatggaacttttggtgtcttgggtcatggtgataggggaaacatttcatgtcctagag 1288
|||||||||| ||||||||| | || || || ||||||| ||| | |||| ||||||||
Sbjct: 251 gtgatggaacatttggtgtcctaggccacggagatagggaaaatgtctcatatcctagag 310
Query: 1289 aagtggaatccttatcagggctgaggacaatagctgttgcatgtggagtgtggcacactg 1348
|||| |||||||| || || |||||||||||||||||||||||||||||||||| ||||
Sbjct: 311 aagtagaatccttgtctggtttgaggacaatagctgttgcatgtggagtgtggcatactg 370
Query: 1349 cagccgtggtagaggttattgcaacgcaaactagtgcgagtttatcatcaggtaaattgt 1408
|||| || ||| | ||||||| || ||| | ||||| ||| |||| ||||||||||| |
Sbjct: 371 cagctgtagta-aagttattgtgacacaatccagtgcaagtgtatcgtcaggtaaattat 429
Query: 1409 ttac-ttggggtgatgg 1424
|||| ||||||||||||
Sbjct: 430 ttactttggggtgatgg 446
>gnl|LJGI|TC81682 similar to UniRef100_A7PQZ5 Cluster: Chromosome chr6 scaffold_25,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr6 scaffold_25, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (37%)
Length = 1246
Score = 97.6 bits (49), Expect = 3e-19
Identities = 175/217 (80%)
Strand = Plus / Plus
Query: 1666 gaaatcgcatgtggtgcatatcacgtggctgttttaacatccaaaaatgaagtttacact 1725
||||| || |||||||||||||| || || |||||||| || | | |||||||||||||
Sbjct: 206 gaaatagcttgtggtgcatatcatgttgcggttttaacttcaaggactgaagtttacact 265
Query: 1726 tggggtaagggtgcaaatgggagattgggtcatggagatcttgaagatcgaaaaacacca 1785
|||||||||||||||||||| | || || ||||||||| ||| ||| ||| | |||
Sbjct: 266 tggggtaagggtgcaaatggtcgtttaggccatggagatactgatgataaaaactcccca 325
Query: 1786 actctggttgaagcattgaaggaccgacatgtgaaatatattgcatgtggttcaaactac 1845
|| | || ||||||||||| ||| ||| || ||| |||||| |||||| |||| | |
Sbjct: 326 acattagtagaagcattgaaagacaaacaagtcaaaagtattgcttgtggtacaaatttc 385
Query: 1846 tcggctgccatatgccttcataagtgggtatctggtg 1882
| || ||||||||||| |||||||||||||||||||
Sbjct: 386 accgcagccatatgcctgcataagtgggtatctggtg 422