Miyakogusa Predicted Gene
- Lj0g3v0311259.3
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0311259.3 tr|G7L6M8|G7L6M8_MEDTR F-box protein OS=Medicago
truncatula GN=MTR_7g078900 PE=4 SV=1,32.42,6e-19,seg,NULL;
F_box_assoc_1: F-box protein interaction domain,F-box associated
interaction domain; FBA_1,CUFF.21007.3
(751 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC78617 similar to UniRef100_A2Q4Y0 Cluster: F-box prot... 200 9e-51
gnl|LJGI|CB826878 similar to UniRef100_Q9BKD3 Cluster: TSO45-4B;... 168 3e-41
gnl|LJGI|TC78296 168 3e-41
gnl|LJGI|TC79437 159 3e-38
gnl|LJGI|GO035798 weakly similar to UniRef100_Q12X80 Cluster: 4F... 94 1e-18
gnl|LJGI|TC59517 weakly similar to UniRef100_Q2HRF5 Cluster: Cyc... 68 9e-11
gnl|LJGI|TC79482 weakly similar to UniRef100_A7Q9Q9 Cluster: Chr... 60 2e-08
gnl|LJGI|TC73392 60 2e-08
>gnl|LJGI|TC78617 similar to UniRef100_A2Q4Y0 Cluster: F-box protein interaction
domain; n=1; Medicago truncatula|Rep: F-box protein
interaction domain - Medicago truncatula (Barrel medic),
partial (8%)
Length = 518
Score = 200 bits (101), Expect = 9e-51
Identities = 229/272 (84%), Gaps = 6/272 (2%)
Strand = Plus / Plus
Query: 474 ttttgtggtttggcaaatgaaggagtttggagtgcacaagacatggactcagttgttcaa 533
||||||||| ||||||||||||||||||||||||||| || | |||||||| ||||| ||
Sbjct: 54 ttttgtggtatggcaaatgaaggagtttggagtgcacgagtcttggactcaattgtttaa 113
Query: 534 cattattatcgatgccggtgacaaatgtattccctggccctgttttgcaacgtgcttatc 593
||||||| || ||| | | | | ||| | |||||||||||| | |||| | ||
Sbjct: 114 cattattgtccatg------aaagaattcttcacacgccctgttttgctatgtgcatgtc 167
Query: 594 tgagaatggcgatgccctgttgttgtccaaatctggtgtgtctcaagcagttctctatat 653
||||||||| |||||||||||||| | |||||||||||||| ||||||||||||||||
Sbjct: 168 tgagaatggtgatgccctgttgtttgcaaaatctggtgtgtcccaagcagttctctataa 227
Query: 654 caggagagaaaataaattagaagccacaaaaatcgctaacaacatcgttggttgctttgt 713
| ||||||||| ||||| |||| ||||||||| | ||||||||||||||||| || |||
Sbjct: 228 ccagagagaaaagaaattcgaagacacaaaaattggtaacaacatcgttggttcctatgt 287
Query: 714 cgagaattacattgaaagcttggtttcacctt 745
| |||||||||||||||||||||||||||||
Sbjct: 288 caggaattacattgaaagcttggtttcacctt 319
>gnl|LJGI|CB826878 similar to UniRef100_Q9BKD3 Cluster: TSO45-4B; n=1; Taenia
solium|Rep: TSO45-4B - Taenia solium (Pork tapeworm),
partial (5%)
Length = 635
Score = 168 bits (85), Expect = 3e-41
Identities = 218/263 (82%), Gaps = 17/263 (6%)
Strand = Plus / Plus
Query: 405 gccaattctcggagttttgagggatttgctgtgtgtttctcaaaatgatattgacaacca 464
|||||| || |||||||||||||||| || ||||||||||||||||| ||| |
Sbjct: 383 gccaatcctaggagttttgagggattccctatgtgtttctcaaaatga------caagaa 436
Query: 465 aactcgtaattttgtggtttggcaaatgaaggagtttggagtgcacaagacatggactca 524
||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 437 aacccgtaattttgtggtttggcaaatgaaggagtttggagtgcacaagtcatggactca 496
Query: 525 gttgttcaacattattatcgatgccggtgacaaatgtattccctggccctgttttgcaac 584
|||||||||||| || || || |||||| | | || ||||||| | ||||||||
Sbjct: 497 gttgttcaacatcat------tggcgatgacaatttttttagctggccccggtttgcaac 550
Query: 585 gtg-----cttatctgagaatggcgatgccctgttgttgtccaaatctggtgtgtctcaa 639
||| ||||||||||||||| |||||| |||||||||| | || ||||| ||| |||
Sbjct: 551 gtgcttatcttatctgagaatggggatgccttgttgttgtcaacatatggtgggtcccaa 610
Query: 640 gcagttctctatatcaggagaga 662
||| ||||||||||| |||||||
Sbjct: 611 gcaattctctatatcgggagaga 633
>gnl|LJGI|TC78296
Length = 551
Score = 168 bits (85), Expect = 3e-41
Identities = 225/272 (82%), Gaps = 6/272 (2%)
Strand = Plus / Plus
Query: 474 ttttgtggtttggcaaatgaaggagtttggagtgcacaagacatggactcagttgttcaa 533
||||||||| | |||||||||||||| ||||||| || || |||||||||| ||||| ||
Sbjct: 112 ttttgtggtatcgcaaatgaaggagtatggagtgaacgagtcatggactcaattgtttaa 171
Query: 534 cattattatcgatgccggtgacaaatgtattccctggccctgttttgcaacgtgcttatc 593
||||||| || ||| | | | | ||| || |||||||||||| | |||| | ||
Sbjct: 172 cattattgtccatg------aaagaattcttcactcgccctgttttgctatgtgcatgtc 225
Query: 594 tgagaatggcgatgccctgttgttgtccaaatctggtgtgtctcaagcagttctctatat 653
||||||||| |||| ||||||||| | | ||||||||||| ||||||||||||||||
Sbjct: 226 tgagaatggtgatgtcctgttgtttgcagagtctggtgtgtcccaagcagttctctataa 285
Query: 654 caggagagaaaataaattagaagccacaaaaatcgctaacaacatcgttggttgctttgt 713
| |||||| ||||||||||||| ||| ||||||||||||||||||||||||| || |||
Sbjct: 286 ccagagagataataaattagaagacacgaaaatcgctaacaacatcgttggttcctatgt 345
Query: 714 cgagaattacattgaaagcttggtttcacctt 745
| ||||||||||||||| ||| |||||||||
Sbjct: 346 caggaattacattgaaagtttgatttcacctt 377
>gnl|LJGI|TC79437
Length = 744
Score = 159 bits (80), Expect = 3e-38
Identities = 225/272 (82%), Gaps = 6/272 (2%)
Strand = Plus / Plus
Query: 474 ttttgtggtttggcaaatgaaggagtttggagtgcacaagacatggactcagttgttcaa 533
||||||||| | |||||||||||||| ||||||| || || |||||||||| ||||| ||
Sbjct: 157 ttttgtggtatcgcaaatgaaggagtatggagtgaacgagtcatggactcaattgtttaa 216
Query: 534 cattattatcgatgccggtgacaaatgtattccctggccctgttttgcaacgtgcttatc 593
||||||| || |||| | ||| | ||| || |||||||||||| | |||| | ||
Sbjct: 217 cattattgtccatgcaag-----aat-tcttcactcgccctgttttgctatgtgcatgtc 270
Query: 594 tgagaatggcgatgccctgttgttgtccaaatctggtgtgtctcaagcagttctctatat 653
||||||||| |||| ||||||||| | | ||||||||||| ||||||||||||||||
Sbjct: 271 tgagaatggtgatgtcctgttgtttgcagagtctggtgtgtcccaagcagttctctataa 330
Query: 654 caggagagaaaataaattagaagccacaaaaatcgctaacaacatcgttggttgctttgt 713
| |||||| ||||||||||||| ||| || |||||||||||||||||||||| || |||
Sbjct: 331 ccagagagataataaattagaagacacgaacatcgctaacaacatcgttggttcctatgt 390
Query: 714 cgagaattacattgaaagcttggtttcacctt 745
| | ||||||||||||| ||| |||||||||
Sbjct: 391 caggcattacattgaaagtttgatttcacctt 422
>gnl|LJGI|GO035798 weakly similar to UniRef100_Q12X80 Cluster: 4Fe-4S ferredoxin,
iron-sulfur binding; n=1; Methanococcoides burtonii DSM
6242|Rep: 4Fe-4S ferredoxin, iron-sulfur binding -
Methanococcoides burtonii (strain DSM 6242), partial
(10%)
Length = 581
Score = 93.7 bits (47), Expect = 1e-18
Identities = 65/71 (91%)
Strand = Plus / Plus
Query: 470 gtaattttgtggtttggcaaatgaaggagtttggagtgcacaagacatggactcagttgt 529
||||||| || |||||||||||||||||||||||||| |||||| | |||||||||||||
Sbjct: 67 gtaatttggttgtttggcaaatgaaggagtttggagtacacaagtcttggactcagttgt 126
Query: 530 tcaacattatt 540
| |||||||||
Sbjct: 127 tgaacattatt 137
>gnl|LJGI|TC59517 weakly similar to UniRef100_Q2HRF5 Cluster: Cyclin-like F-box; n=1;
Medicago truncatula|Rep: Cyclin-like F-box - Medicago
truncatula (Barrel medic), partial (42%)
Length = 1382
Score = 67.9 bits (34), Expect = 9e-11
Identities = 52/58 (89%)
Strand = Plus / Plus
Query: 473 attttgtggtttggcaaatgaaggagtttggagtgcacaagacatggactcagttgtt 530
|||||| | ||||||||||||| ||||||||||||||||| | ||||||||||||||
Sbjct: 881 attttgcgatttggcaaatgaaagagtttggagtgcacaattcttggactcagttgtt 938
Score = 60.0 bits (30), Expect = 2e-08
Identities = 33/34 (97%)
Strand = Plus / Plus
Query: 718 aattacattgaaagcttggtttcaccttgttgaa 751
||||||||||||||||||||||| ||||||||||
Sbjct: 1123 aattacattgaaagcttggtttctccttgttgaa 1156
>gnl|LJGI|TC79482 weakly similar to UniRef100_A7Q9Q9 Cluster: Chromosome chr5
scaffold_67, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr5 scaffold_67, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (10%)
Length = 551
Score = 60.0 bits (30), Expect = 2e-08
Identities = 44/48 (91%), Gaps = 3/48 (6%)
Strand = Plus / Plus
Query: 208 caaggagctgcagtttatgtgaggaataacactcttaattggttagca 255
|||||| |||||||||||||||| ||||||||||||||||||||||
Sbjct: 465 caaggatctgcagtttatgtgag---taacactcttaattggttagca 509
>gnl|LJGI|TC73392
Length = 647
Score = 60.0 bits (30), Expect = 2e-08
Identities = 44/48 (91%), Gaps = 3/48 (6%)
Strand = Plus / Plus
Query: 208 caaggagctgcagtttatgtgaggaataacactcttaattggttagca 255
|||||| |||||||||||||||| ||||||||||||||||||||||
Sbjct: 501 caaggatctgcagtttatgtgag---taacactcttaattggttagca 545