Miyakogusa Predicted Gene
- Lj0g3v0311049.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0311049.1 Non Chatacterized Hit- tr|J3N9G6|J3N9G6_ORYBR
Uncharacterized protein OS=Oryza brachyantha
GN=OB11G2,41.59,9e-19,seg,NULL; coiled-coil,NULL; EF-hand,NULL;
EF_HAND_1,EF-Hand 1, calcium-binding site; no
description,,CUFF.20980.1
(633 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC58349 weakly similar to UniRef100_A7PMY0 Cluster: Chr... 1227 0.0
gnl|LJGI|TC68185 weakly similar to UniRef100_A7PMY0 Cluster: Chr... 222 2e-57
gnl|LJGI|BP065260 similar to UniRef100_Q4SHC9 Cluster: Chromosom... 123 1e-27
>gnl|LJGI|TC58349 weakly similar to UniRef100_A7PMY0 Cluster: Chromosome chr14
scaffold_21, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr14 scaffold_21, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (17%)
Length = 838
Score = 1227 bits (619), Expect = 0.0
Identities = 630/633 (99%), Gaps = 3/633 (0%)
Strand = Plus / Plus
Query: 1 atggttcttcctcaatttgagtgcttcatggctgaggacaagacatcacaacagagtgat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 117 atggttcttcctcaatttgagtgcttcatggctgaggacaagacatcacaacagagtgat 176
Query: 61 agcaactccacttcttcttttttgtttggtttggtggactttctcacatgccaaacatgt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 177 agcaactccacttcttcttttttgtttggtttggtggactttctcacatgccaaacatgt 236
Query: 121 tttcacaaaatcctcatgtttttctcaactttaaagtttttctttctgtgccaaattcac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 237 tttcacaaaatcctcatgtttttctcaactttaaagtttttctttctgtgccaaattcac 296
Query: 181 cctagtaataactcagaggtaagggaagagttagaggaggaggaggagcaggtttcagaa 240
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 297 cctagtaataactcagaggtaagggaagagttagagg---aggaggagcaggtttcagaa 353
Query: 241 tctgaccaagagagtgagtactactcaagctactcaagtgaggagcatattgaaagggat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 354 tctgaccaagagagtgagtactactcaagctactcaagtgaggagcatattgaaagggat 413
Query: 301 gaagtgaagatggtgatggaaaatttgggattgttttacagttcagaaagtgaggaactg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 414 gaagtgaagatggtgatggaaaatttgggattgttttacagttcagaaagtgaggaactg 473
Query: 361 aatgaaaattatggttccaatgagatttcagaattgtttgaggatcaggagccaagtgtg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 474 aatgaaaattatggttccaatgagatttcagaattgtttgaggatcaggagccaagtgtg 533
Query: 421 gaggagttgaagaaggcttttgatgtgtttgatgagaacagagatgggtttattgatgcc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 534 gaggagttgaagaaggcttttgatgtgtttgatgagaacagagatgggtttattgatgcc 593
Query: 481 aaggagctgcagagcgttctctctgttttgggattcaaggaagcagcagaaattgaggac 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 594 aaggagctgcagagcgttctctctgttttgggattcaaggaagcagcagaaattgaggac 653
Query: 541 tgccagattatgatcaagaaatttgatgaaaatcaagatgggagaattgatttgattgag 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 654 tgccagattatgatcaagaaatttgatgaaaatcaagatgggagaattgatttgattgag 713
Query: 601 tttgaaaaaattatgcaaaatagcttctgctga 633
|||||||||||||||||||||||||||||||||
Sbjct: 714 tttgaaaaaattatgcaaaatagcttctgctga 746
>gnl|LJGI|TC68185 weakly similar to UniRef100_A7PMY0 Cluster: Chromosome chr14
scaffold_21, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr14 scaffold_21, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (17%)
Length = 618
Score = 222 bits (112), Expect = 2e-57
Identities = 223/260 (85%)
Strand = Plus / Plus
Query: 345 agaaagtgaggaactgaatgaaaattatggttccaatgagatttcagaattgtttgagga 404
||||||||||||||| | ||||| ||||||||||| ||| |||| ||| ||||||||||
Sbjct: 359 agaaagtgaggaacttgaagaaaagtatggttccaaggagctttctgaactgtttgagga 418
Query: 405 tcaggagccaagtgtggaggagttgaagaaggcttttgatgtgtttgatgagaacagaga 464
|||||||| || |||||||| ||||| ||||||||||||| |||||||||||||||||
Sbjct: 419 ccaggagcccagcttggaggaggtgaagcaggcttttgatgtttttgatgagaacagaga 478
Query: 465 tgggtttattgatgccaaggagctgcagagcgttctctctgttttgggattcaaggaagc 524
||||||||||||||| | ||| ||||| || ||||||| |||||||||||| |||||||
Sbjct: 479 tgggtttattgatgcaagggaactgcatagagttctctgtgttttgggattgaaggaaga 538
Query: 525 agcagaaattgaggactgccagattatgatcaagaaatttgatgaaaatcaagatgggag 584
||||| || ||| | ||| |||| ||||||| || |||||| | ||||||||||| ||
Sbjct: 539 agcaggcatcgagaaatgcaagataatgatcagaaactttgataagaatcaagatggaag 598
Query: 585 aattgatttgattgagtttg 604
||||||||| ||||||||||
Sbjct: 599 aattgatttcattgagtttg 618
>gnl|LJGI|BP065260 similar to UniRef100_Q4SHC9 Cluster: Chromosome 5 SCAF14581, whole
genome shotgun sequence; n=1; Tetraodon
nigroviridis|Rep: Chromosome 5 SCAF14581, whole genome
shotgun sequence - Tetraodon nigroviridis (Green
puffer), partial (6%)
Length = 446
Score = 123 bits (62), Expect = 1e-27
Identities = 239/293 (81%), Gaps = 4/293 (1%)
Strand = Plus / Minus
Query: 345 agaaagtgaggaactgaatgaaaattatggttccaatgagatttcagaattgtttgagga 404
||||||||||||||| | ||||| ||||||||| | ||| |||| ||| ||||||||||
Sbjct: 346 agaaagtgaggaacttgaagaaaagtatggttcccaggagctttctgaactgtttgagga 287
Query: 405 tcaggagccaagtgtggaggagttgaaga-aggcttttgatgtgtttg-atgagaacaga 462
| |||||| | |||||| |||| ||||||||||| | |||| |||||||||||
Sbjct: 286 cccggagccccgcttggagggagtgaanccaggcttttgatatttttggatgagaacaga 227
Query: 463 gatgggttt-attgatgccaagg-agctgcagagcgttctctctgttttgggattcaagg 520
||||||||| ||||||||||||| | ||||| || ||||||| |||||||||||| ||||
Sbjct: 226 gatgggttttattgatgccaagggaactgcatagagttctctgtgttttgggattgaagg 167
Query: 521 aagcagcagaaattgaggactgccagattatgatcaagaaatttgatgaaaatcaagatg 580
||| | | | || ||| | |||||||| |||||| || |||||| | |||| |||||
Sbjct: 166 aagaacccggcatcgagaaatgccagataatgatccgaaactttgataagaatccagatg 107
Query: 581 ggagaattgatttgattgagtttgaaaaaattatgcaaaatagcttctgctga 633
| ||||||||||| ||||||||| |||||||||| ||||| | |||||||||
Sbjct: 106 gaagaattgatttccttgagtttgtaaaaattatggaaaatcgattctgctga 54