Miyakogusa Predicted Gene
- Lj0g3v0311009.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0311009.1 tr|B9HB15|B9HB15_POPTR Predicted protein
OS=Populus trichocarpa GN=POPTRDRAFT_762913 PE=4
SV=1,45.69,4e-17,UCH,Peptidase C19, ubiquitin carboxyl-terminal
hydrolase 2; Cysteine proteinases,NULL; seg,NULL,CUFF.21004.1
(1416 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|GO012545 weakly similar to UniRef100_A5B4K5 Cluster: Ub... 674 0.0
gnl|LJGI|TC70980 weakly similar to UniRef100_A5B4K5 Cluster: Ubi... 402 e-111
gnl|LJGI|TC68350 weakly similar to UniRef100_A5B4K5 Cluster: Ubi... 391 e-108
>gnl|LJGI|GO012545 weakly similar to UniRef100_A5B4K5 Cluster: Ubiquitin
carboxyl-terminal hydrolase; n=1; Vitis vinifera|Rep:
Ubiquitin carboxyl-terminal hydrolase - Vitis vinifera
(Grape), partial (8%)
Length = 560
Score = 674 bits (340), Expect = 0.0
Identities = 340/340 (100%)
Strand = Plus / Plus
Query: 1066 cttgcaacttctatggaagtagaagacttatctgggcgtggtgaaagagatcaaatgcat 1125
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 221 cttgcaacttctatggaagtagaagacttatctgggcgtggtgaaagagatcaaatgcat 280
Query: 1126 aatagtttaatgagtatgctaactcgaggtttggaggagacagtcgttgcacgttgggat 1185
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 281 aatagtttaatgagtatgctaactcgaggtttggaggagacagtcgttgcacgttgggat 340
Query: 1186 gatatagaaatagcttcatctcgggccctagagacaaagagtagtgagaaggttaaggac 1245
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 341 gatatagaaatagcttcatctcgggccctagagacaaagagtagtgagaaggttaaggac 400
Query: 1246 attggatatgttggggatgaatgggatgaagaattagataaggggaagaggaagaagtta 1305
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 401 attggatatgttggggatgaatgggatgaagaattagataaggggaagaggaagaagtta 460
Query: 1306 aggaccttcaaacacaactttgatgggccaaatattttccaagaaattgctactgagaaa 1365
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 461 aggaccttcaaacacaactttgatgggccaaatattttccaagaaattgctactgagaaa 520
Query: 1366 ttcaagtcgaaaagggccaagttggaagggaaccctccat 1405
||||||||||||||||||||||||||||||||||||||||
Sbjct: 521 ttcaagtcgaaaagggccaagttggaagggaaccctccat 560
Score = 216 bits (109), Expect = 3e-55
Identities = 109/109 (100%)
Strand = Plus / Plus
Query: 934 aagttgagtttgaggaatctaaacaaagaaaagttggataaacattctttgtcatccgac 993
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2 aagttgagtttgaggaatctaaacaaagaaaagttggataaacattctttgtcatccgac 61
Query: 994 gttggattatcttccagtgatgtatctccctgtgtatcgagttgctttg 1042
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 62 gttggattatcttccagtgatgtatctccctgtgtatcgagttgctttg 110
>gnl|LJGI|TC70980 weakly similar to UniRef100_A5B4K5 Cluster: Ubiquitin
carboxyl-terminal hydrolase; n=1; Vitis vinifera|Rep:
Ubiquitin carboxyl-terminal hydrolase - Vitis vinifera
(Grape), partial (9%)
Length = 710
Score = 402 bits (203), Expect = e-111
Identities = 265/285 (92%), Gaps = 3/285 (1%)
Strand = Plus / Plus
Query: 1104 tggtgaaagagatcaaatgcataatagtttaatgagtatgctaactcgaggtttggagga 1163
|||| ||||||||||||||||||||||||||||||||||||| |||||||| ||||||||
Sbjct: 7 tggtaaaagagatcaaatgcataatagtttaatgagtatgcttactcgaggattggagga 66
Query: 1164 gacagtcgttgcacgttgggatgatatagaaatagcttcatctcgggccctagagacaaa 1223
|||||| |||||||||||||||||| ||||||||||||||||||||| | | || |||
Sbjct: 67 gacagttgttgcacgttgggatgatgtagaaatagcttcatctcgggtcatggactcaag 126
Query: 1224 gagtagtgagaaggttaaggacattggatatgttggggatgaatgggatgaagaattaga 1283
|| | || || ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 127 gaat---gacaaaattaaggacattggatatgttggggatgaatgggatgaagaattaga 183
Query: 1284 taaggggaagaggaagaagttaaggaccttcaaacacaactttgatgggccaaatatttt 1343
|||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||
Sbjct: 184 taaggggaagaggaagaagttaaggaccttcaaacacagctttgatggaccaaatatttt 243
Query: 1344 ccaagaaattgctactgagaaattcaagtcgaaaagggccaagtt 1388
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 244 ccaagaaattgctactgagaaattcaagtcgaaaagggccaagtt 288
>gnl|LJGI|TC68350 weakly similar to UniRef100_A5B4K5 Cluster: Ubiquitin
carboxyl-terminal hydrolase; n=1; Vitis vinifera|Rep:
Ubiquitin carboxyl-terminal hydrolase - Vitis vinifera
(Grape), partial (4%)
Length = 617
Score = 391 bits (197), Expect = e-108
Identities = 197/197 (100%)
Strand = Plus / Plus
Query: 1220 caaagagtagtgagaaggttaaggacattggatatgttggggatgaatgggatgaagaat 1279
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2 caaagagtagtgagaaggttaaggacattggatatgttggggatgaatgggatgaagaat 61
Query: 1280 tagataaggggaagaggaagaagttaaggaccttcaaacacaactttgatgggccaaata 1339
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 62 tagataaggggaagaggaagaagttaaggaccttcaaacacaactttgatgggccaaata 121
Query: 1340 ttttccaagaaattgctactgagaaattcaagtcgaaaagggccaagttggaagggaacc 1399
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122 ttttccaagaaattgctactgagaaattcaagtcgaaaagggccaagttggaagggaacc 181
Query: 1400 ctccattcaggatatga 1416
|||||||||||||||||
Sbjct: 182 ctccattcaggatatga 198