Miyakogusa Predicted Gene

Lj0g3v0310879.1
Show Alignment:  
BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0310879.1 Non Chatacterized Hit- tr|D7LCK4|D7LCK4_ARALL
Putative uncharacterized protein OS=Arabidopsis
lyrata,38.69,2e-17,coiled-coil,NULL,CUFF.20967.1
         (439 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|FS352866 similar to UniRef100_A3CMX0 Cluster: Sensor pr...   733   0.0  

>gnl|LJGI|FS352866 similar to UniRef100_A3CMX0 Cluster: Sensor protein; n=1;
           Streptococcus sanguinis SK36|Rep: Sensor protein -
           Streptococcus sanguinis (strain SK36), partial (5%)
          Length = 698

 Score =  733 bits (370), Expect = 0.0
 Identities = 370/370 (100%)
 Strand = Plus / Minus

                                                                       
Query: 70  gcagctaattatgaggattacacaggggacaataagaataatggtcaaagcgctccaatt 129
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 698 gcagctaattatgaggattacacaggggacaataagaataatggtcaaagcgctccaatt 639

                                                                       
Query: 130 ttgtcagcaaaagcgatctcaatagatggtgtaaatgaagatgaacagagagaaactaag 189
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 638 ttgtcagcaaaagcgatctcaatagatggtgtaaatgaagatgaacagagagaaactaag 579

                                                                       
Query: 190 gatttggatgctaaggtcaatgccattaaagatagagtagaaaaccggcctacattttct 249
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 578 gatttggatgctaaggtcaatgccattaaagatagagtagaaaaccggcctacattttct 519

                                                                       
Query: 250 gaagcagctgagaaaattgtactagaatctttagaatctgcggatactcaacatgaaaat 309
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 518 gaagcagctgagaaaattgtactagaatctttagaatctgcggatactcaacatgaaaat 459

                                                                       
Query: 310 gatgaaggtgttcttcaaagttcttcagcctttgcacctgggtatgttccaaatgagttt 369
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 458 gatgaaggtgttcttcaaagttcttcagcctttgcacctgggtatgttccaaatgagttt 399

                                                                       
Query: 370 gatggcagggttttctttcgtttagtagggaggtttgcctacttgaaatttgtctatatg 429
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 398 gatggcagggttttctttcgtttagtagggaggtttgcctacttgaaatttgtctatatg 339

                     
Query: 430 aaattgtgat 439
           ||||||||||
Sbjct: 338 aaattgtgat 329