Miyakogusa Predicted Gene

Lj0g3v0310849.1

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0310849.1 CUFF.21053.1
         (1443 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC77155 similar to UniRef100_A7NXG9 Cluster: Chromosome...   581   e-165
gnl|LJGI|FS339207 similar to UniRef100_A7R1X0 Cluster: Chromosom...    58   2e-07
gnl|LJGI|TC58641 similar to UniRef100_A7R1X0 Cluster: Chromosome...    58   2e-07

>gnl|LJGI|TC77155 similar to UniRef100_A7NXG9 Cluster: Chromosome chr5 scaffold_2,
            whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
            Chromosome chr5 scaffold_2, whole genome shotgun sequence
            - Vitis vinifera (Grape), partial (12%)
          Length = 645

 Score =  581 bits (293), Expect = e-165
 Identities = 299/301 (99%)
 Strand = Plus / Plus

                                                                        
Query: 1143 tggaaatccaggtgtgtatggtgctgttggagggcgcactgggagtaccccaaatagtaa 1202
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2    tggaaatccaggtgtgtatggtgctgttggagggcgcactgggagtaccccaaatagtaa 61

                                                                        
Query: 1203 tgccagtggtcctggtgggagtgagctacaaggtagtggtggcaggggtaggtatatggg 1262
            ||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||
Sbjct: 62   tgccagtggtcctggtgggagtgagctacaaggtagtggtggcagtggtagttatatggg 121

                                                                        
Query: 1263 tagtggctatggggatgcaaatggaaattcaggttatggaaatgcagcttggagatctga 1322
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122  tagtggctatggggatgcaaatggaaattcaggttatggaaatgcagcttggagatctga 181

                                                                        
Query: 1323 acaagctcaagcaactggaaattatgggactcctcagggaaatggctcccatggtgggca 1382
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 182  acaagctcaagcaactggaaattatgggactcctcagggaaatggctcccatggtgggca 241

                                                                        
Query: 1383 agttggttatggtggaggctatggcggtgctcagtctcgacaagcccaacaacagtaatt 1442
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 242  agttggttatggtggaggctatggcggtgctcagtctcgacaagcccaacaacagtaatt 301

             
Query: 1443 t 1443
            |
Sbjct: 302  t 302


>gnl|LJGI|FS339207 similar to UniRef100_A7R1X0 Cluster: Chromosome undetermined
           scaffold_383, whole genome shotgun sequence; n=1; Vitis
           vinifera|Rep: Chromosome undetermined scaffold_383,
           whole genome shotgun sequence - Vitis vinifera (Grape),
           partial (33%)
          Length = 622

 Score = 58.0 bits (29), Expect = 2e-07
 Identities = 38/41 (92%)
 Strand = Plus / Plus

                                                    
Query: 16  ggcaagcttttcatcggtgggatttcatgggacacgaatga 56
           |||||||||||||| ||||||||||| |||||||| |||||
Sbjct: 182 ggcaagcttttcattggtgggatttcctgggacacaaatga 222


>gnl|LJGI|TC58641 similar to UniRef100_A7R1X0 Cluster: Chromosome undetermined
           scaffold_383, whole genome shotgun sequence; n=1; Vitis
           vinifera|Rep: Chromosome undetermined scaffold_383,
           whole genome shotgun sequence - Vitis vinifera (Grape),
           partial (58%)
          Length = 2146

 Score = 58.0 bits (29), Expect = 2e-07
 Identities = 38/41 (92%)
 Strand = Plus / Plus

                                                    
Query: 16  ggcaagcttttcatcggtgggatttcatgggacacgaatga 56
           |||||||||||||| ||||||||||| |||||||| |||||
Sbjct: 142 ggcaagcttttcattggtgggatttcctgggacacaaatga 182