Miyakogusa Predicted Gene

Lj0g3v0310799.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0310799.1 Non Chatacterized Hit- tr|I1NDZ8|I1NDZ8_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,73.68,0,seg,NULL;
coiled-coil,NULL,CUFF.20960.1
         (513 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC61656 weakly similar to UniRef100_A7QGN9 Cluster: Chr...   230   7e-60

>gnl|LJGI|TC61656 weakly similar to UniRef100_A7QGN9 Cluster: Chromosome chr12
           scaffold_93, whole genome shotgun sequence; n=1; Vitis
           vinifera|Rep: Chromosome chr12 scaffold_93, whole genome
           shotgun sequence - Vitis vinifera (Grape), partial (11%)
          Length = 806

 Score =  230 bits (116), Expect = 7e-60
 Identities = 233/272 (85%)
 Strand = Plus / Plus

                                                                       
Query: 1   atggccttagctttggtgggtcaagcacttatctcttcttgtgtggacatcttattaagc 60
           |||||||||||| |||||||  | |||||||||||| ||| |||||| || |||||    
Sbjct: 60  atggccttagctatggtgggagaggcacttatctctgcttctgtggagatattattggat 119

                                                                       
Query: 61  aggatagcttccagtgagtttcgagatttctatgccaatagaaagctgaatgaatctctg 120
           | |||| | ||||  |||||||||||||||| |||||| |||||| ||||||  ||||| 
Sbjct: 120 aagataacgtccaaggagtttcgagatttctttgccaacagaaagttgaatgtttctctc 179

                                                                       
Query: 121 ttagatgagttgaagataaagttgctggcacttaatgctgtgctcaatgatgcagaggag 180
           || |||||||| |||||||||||| |||||||||||||||| ||||||||||||||||||
Sbjct: 180 ttggatgagttaaagataaagttgttggcacttaatgctgtcctcaatgatgcagaggag 239

                                                                       
Query: 181 aagcagattactgatcttgcagtgaaagcatggcttgatgagttaaaagatgctgtctta 240
           |||||||| ||||||| ||||||||||| ||||||||||||| | || ||||||||||| 
Sbjct: 240 aagcagatcactgatcctgcagtgaaagaatggcttgatgagctcaaggatgctgtcttg 299

                                           
Query: 241 gatgcagaagatatactggatgaaataaacac 272
           ||||| || ||| || |||||||||| |||||
Sbjct: 300 gatgctgaggatttattggatgaaatcaacac 331