Miyakogusa Predicted Gene
- Lj0g3v0310349.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0310349.1 tr|G7JFX3|G7JFX3_MEDTR GRAS family transcription
factor OS=Medicago truncatula GN=MTR_4g026490 PE=4
,49.55,6e-17,GRAS,Transcription factor GRAS; SUBFAMILY NOT NAMED,NULL;
FAMILY NOT NAMED,NULL; seg,NULL,CUFF.20941.1
(2093 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC74075 weakly similar to UniRef100_A7PYF4 Cluster: Chr... 1380 0.0
gnl|LJGI|TC70194 weakly similar to UniRef100_A7PYF4 Cluster: Chr... 952 0.0
gnl|LJGI|AV419737 similar to UniRef100_A7PYF4 Cluster: Chromosom... 272 8e-72
gnl|LJGI|TC71415 similar to UniRef100_A7PYF4 Cluster: Chromosome... 157 3e-37
>gnl|LJGI|TC74075 weakly similar to UniRef100_A7PYF4 Cluster: Chromosome chr15
scaffold_37, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr15 scaffold_37, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (6%)
Length = 867
Score = 1380 bits (696), Expect = 0.0
Identities = 736/755 (97%)
Strand = Plus / Plus
Query: 1 atgaaggccatgcccttgtccccttttgaggaatttcaagggaagaagggtgtgttgttg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 113 atgaaggccatgcccttgtccccttttgaggaatttcaagggaagaagggtgtgttgttg 172
Query: 61 gatttcacctcatcctcagattcattctcactgcttttannnnnnnnnnnnnnnnngaat 120
||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 173 gatttcacctcatcctcagattcattctcactgcttttacatcatcatcatcatcagaat 232
Query: 121 cagccacaaaagtggacctgcagtgacaaaaaggaggatttttgctatgtgggcagcact 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 233 cagccacaaaagtggacctgcagtgacaaaaaggaggatttttgctatgtgggcagcact 292
Query: 181 gagcccaactctgttcttgactccagaagaagcccaacctctcctacctccttctccaca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 293 gagcccaactctgttcttgactccagaagaagcccaacctctcctacctccttctccaca 352
Query: 241 atgtcctcctctcttggcagcagcagcagcaacagctccggcaacggtggtggtggtggc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 353 atgtcctcctctcttggcagcagcagcagcaacagctccggcaacggtggtggtggtggc 412
Query: 301 tcagccaacaccaccgccacagcagtgccaactgtctcagagaatcttcctcatgaagac 360
||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||
Sbjct: 413 tcagccaacaccaccgccacagcagtgccaaatgtctcaaagaatcttcctcatgaagac 472
Query: 361 tgggatggtcaagatcaatctcttctgagactaatcatgggtgatgttgaagacccatct 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 473 tgggatggtcaagatcaatctcttctgagactaatcatgggtgatgttgaagacccatct 532
Query: 421 gcaggattgaccaagctcttgcaaagcactggttgtgggtctcaaaatgttgatttcagt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 533 gcaggattgaccaagctcttgcaaagcactggttgtgggtctcaaaatgttgatttcagt 592
Query: 481 ggaaattttggtgttgtggatcaagggttgaacatggaaagtgatatcaactcttctatg 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 593 ggaaattttggtgttgtggatcaagggttgaacatggaaagtgatatcaactcttctatg 652
Query: 541 ccagagagttacaattaccctggttttggattcaattctgggaacatggatgctcacaat 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 653 ccagagagttacaattaccctggttttggattcaattctgggaacatggatgctcacaat 712
Query: 601 gctaaggtttcagaatccatgttctcttcttcaggtaatatgaacaatcctcttttggtg 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 713 gctaaggtttcagaatccatgttctcttcttcaggtaatatgaacaatcctcttttggtg 772
Query: 661 tcatcatctcctggtggattcagttctcagcagcaggagtttggggtagtgggtgagaag 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 773 tcatcatctcctggtggattcagttctcagcagcaggagtttggggtagtgggtgagaag 832
Query: 721 cctcaggttatcaacccacagtttctgttaaacca 755
|||||||||||||||||||||||||||||||||||
Sbjct: 833 cctcaggttatcaacccacagtttctgttaaacca 867
>gnl|LJGI|TC70194 weakly similar to UniRef100_A7PYF4 Cluster: Chromosome chr15
scaffold_37, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr15 scaffold_37, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (21%)
Length = 766
Score = 952 bits (480), Expect = 0.0
Identities = 480/480 (100%)
Strand = Plus / Plus
Query: 1614 gccaatctcaagtttcactaattacccatcattgtttcctttagcggttcagtttgtaaa 1673
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8 gccaatctcaagtttcactaattacccatcattgtttcctttagcggttcagtttgtaaa 67
Query: 1674 acagctcaggccaaaaattgttgtcactttggaccgaaactgtgatcgtatcgatttacc 1733
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 68 acagctcaggccaaaaattgttgtcactttggaccgaaactgtgatcgtatcgatttacc 127
Query: 1734 acttcccaacaacataggccatgttcttcaatgttattcagctttgcttgaatcattgga 1793
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 128 acttcccaacaacataggccatgttcttcaatgttattcagctttgcttgaatcattgga 187
Query: 1794 tgctgtaaatgtgaaccaagatgttcttcaaaagatcgagagacatttcgtccaaccagc 1853
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 188 tgctgtaaatgtgaaccaagatgttcttcaaaagatcgagagacatttcgtccaaccagc 247
Query: 1854 tataaagaaaatcgtactgggccaccatcattcgcaggagaaattaactccatggaggaa 1913
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 248 tataaagaaaatcgtactgggccaccatcattcgcaggagaaattaactccatggaggaa 307
Query: 1914 cctgtttcttcaatctggattctctccattcacattcagcaacttcacagaagctcaagc 1973
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 308 cctgtttcttcaatctggattctctccattcacattcagcaacttcacagaagctcaagc 367
Query: 1974 tgagtgtttggtacagagggcgcctgtgcggggatttcaagtggaaagaaaaccctcctc 2033
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 368 tgagtgtttggtacagagggcgcctgtgcggggatttcaagtggaaagaaaaccctcctc 427
Query: 2034 tcttgttctgtgctggcagagaaaagaacttatctcggtttcgacttggagatgctgatc 2093
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 428 tcttgttctgtgctggcagagaaaagaacttatctcggtttcgacttggagatgctgatc 487
>gnl|LJGI|AV419737 similar to UniRef100_A7PYF4 Cluster: Chromosome chr15 scaffold_37,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr15 scaffold_37, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (15%)
Length = 397
Score = 272 bits (137), Expect = 8e-72
Identities = 221/249 (88%)
Strand = Plus / Plus
Query: 1107 ccctactggtaagccttttcagagggctgctttctatatgaaggaggccttgcagttaat 1166
||||| ||||||||||||||| |||||||||||||| ||||||||||| ||||||| |||
Sbjct: 149 ccctaatggtaagccttttcacagggctgctttctacatgaaggaggcattgcagtcaat 208
Query: 1167 gcttcattcaaacattcataatttgatggctttctcacctattagtttcatatttaaaat 1226
|||||||||||| ||| ||||| | | |||||||| |||||||||||||| |||||
Sbjct: 209 gcttcattcaaatggtcacaattttctcaccttctcacccattagtttcatattcaaaat 268
Query: 1227 tggtgcttataaatcgttttctgagatatcaccggttcttcagtttgccaattttacttg 1286
||| ||||||||||| ||||||||||||||||| ||||||||||||||||| ||||||||
Sbjct: 269 tggagcttataaatctttttctgagatatcacctgttcttcagtttgccaactttacttg 328
Query: 1287 caatcaatccctcatcgaggctttggaaaggtttgatcggattcatattattgatttcga 1346
||||||| ||||||| || ||| ||||||| |||||||| ||||| ||||||||||| ||
Sbjct: 329 caatcaagccctcattgaagctgtggaaagatttgatcgaattcacattattgattttga 388
Query: 1347 tatcgggtt 1355
|||||||||
Sbjct: 389 tatcgggtt 397
Score = 107 bits (54), Expect = 3e-22
Identities = 93/106 (87%)
Strand = Plus / Plus
Query: 995 agaaggtgaatcctaccggagacgatgcaaatcaccagctccagcaggctatctttgatc 1054
|||||||| || |||| |||||||||| || ||||||| |||||| ||| |||||||
Sbjct: 4 agaaggtggattctactggagacgatgtgaacaaccagcttcagcagagtatatttgatc 63
Query: 1055 agctatacaagactgctgaactgatagaagctggtaatccggttca 1100
|||||||||| |||||||||||||||||||||||||| ||||||||
Sbjct: 64 agctatacaaaactgctgaactgatagaagctggtaacccggttca 109
>gnl|LJGI|TC71415 similar to UniRef100_A7PYF4 Cluster: Chromosome chr15 scaffold_37,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr15 scaffold_37, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (10%)
Length = 637
Score = 157 bits (79), Expect = 3e-37
Identities = 178/211 (84%)
Strand = Plus / Plus
Query: 1882 cattcgcaggagaaattaactccatggaggaacctgtttcttcaatctggattctctcca 1941
|||||||| || ||||| |||| ||||||| | |||||||||| | ||| |||||||||
Sbjct: 61 cattcgcatgaaaaattgcctccttggaggagcatgtttcttcagtatgggttctctcca 120
Query: 1942 ttcacattcagcaacttcacagaagctcaagctgagtgtttggtacagagggcgcctgtg 2001
|||||||| || |||||||||||| |||||||||||||||| || ||||| || |||||
Sbjct: 121 ttcacatttagtaacttcacagaatctcaagctgagtgtttagtgcagagagcacctgta 180
Query: 2002 cggggatttcaagtggaaagaaaaccctcctctcttgttctgtgctggcagagaaaagaa 2061
|||||||||| | || || || | ||||||| ||||||||||||||||| ||||||
Sbjct: 181 aggggatttcagctagagaggaagcactcctcttttgttctgtgctggcagcagaaagaa 240
Query: 2062 cttatctcggtttcgacttggagatgctgat 2092
|| ||||| ||||| ||||||||||||||||
Sbjct: 241 ctcatctcagtttcaacttggagatgctgat 271