Miyakogusa Predicted Gene
- Lj0g3v0309539.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0309539.1 Non Chatacterized Hit- tr|I1KET9|I1KET9_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.41910
PE,62.63,0,BROMODOMAIN,Bromodomain; Bromodomain,Bromodomain; no
description,Bromodomain; seg,NULL; bromo domain,CUFF.20895.1
(2709 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC80307 similar to UniRef100_A7PJE3 Cluster: Chromosome... 1275 0.0
gnl|LJGI|TC71577 similar to UniRef100_A7PJE3 Cluster: Chromosome... 959 0.0
gnl|LJGI|TC67348 similar to UniRef100_A7PJE3 Cluster: Chromosome... 258 2e-67
gnl|LJGI|BP074682 weakly similar to UniRef100_A7PJE3 Cluster: Ch... 86 1e-15
>gnl|LJGI|TC80307 similar to UniRef100_A7PJE3 Cluster: Chromosome chr12 scaffold_18,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr12 scaffold_18, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (23%)
Length = 691
Score = 1275 bits (643), Expect = 0.0
Identities = 681/691 (98%), Gaps = 2/691 (0%)
Strand = Plus / Plus
Query: 1416 ggcatctgctggtgttccacggcaaattaccaggcctttgcaccatttaagtttgccatt 1475
||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||
Sbjct: 1 ggcatctgctggtgttccacggccaattaccaggcctttgcaccatctaagtttgccatt 60
Query: 1476 attagagaataatcaaggtgtcagtgaaaatctagagaaggagaagagaacgcctaaagc 1535
| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 61 actagagaataatcaaggtgtcagtgacaatctagagaaggagaagagaacgcctaaagc 120
Query: 1536 caaccagttttatcataactcagagttcttgcttgcgaaagataaatttccacctgcaga 1595
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 caaccacttttatcataactcagagttcttgcttgcgaaagataaatttccacctgcaga 180
Query: 1596 gagtaacaagaagtcgaaattgcattggaagaagcaaggtggtggagaattcggacatgg 1655
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 181 gagtaacaagaagtcgaaattgcattggaagaagcaaggtgctggagaattcggacatgg 240
Query: 1656 tcttcggatgggatctaagtttttcaagagctgtagttcactacttgaaaagcttacgaa 1715
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 241 tcttcggatgggatctaagtttttcaagagctgtagttcactacttgaaaagcttatgaa 300
Query: 1716 gcacaagt-ttggttgggtgtttaatactcctgttgatgttgagggtcttggtttgcatg 1774
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 gcacaagtcttggttgggtgtttaatactcctgttgatgttgagggtcttggtttgcatg 360
Query: 1775 attattttactatcattactcacccaatggacttgggaactgtaaagacaaggctgaaca 1834
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 361 attattttactatcattactcacccaatggacttgggaactgtgaagacaaggctgaaca 420
Query: 1835 aaaa-ttggtacaaatcaccaaaggaatttgcagaggatgtgagactcacttttcgtaat 1893
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 aaaacttggtacaaatcaccaaaggaatttgcagaggatgtgagactcacttttcgtaat 480
Query: 1894 gctatgacatataatccggagggacaagatgttcatgtaatggcagaacagttatcaaag 1953
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 gctatgacatataatccggagggacaagatgttcatgtaatggcagaacagttatcaaag 540
Query: 1954 atatttgaggacagatgggctataatagagtcagattacaatcgtgagatgagatatggt 2013
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 atatttgaggacagatgggctataatagagtcagattacaatcgtgagatgagatatggt 600
Query: 2014 gtaagttatggggtagcaccccctgcaccttcacctctgtctagaaaggttcctgcattt 2073
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 gtaagttatggggtagcaccccctgcaccttcacctctgtctagaaaggttcctgcattt 660
Query: 2074 cctcccccgcctcttgatatgagaaggattt 2104
|||||||||||||||||||||||||||||||
Sbjct: 661 cctcccccgcctcttgatatgagaaggattt 691
>gnl|LJGI|TC71577 similar to UniRef100_A7PJE3 Cluster: Chromosome chr12 scaffold_18,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr12 scaffold_18, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (18%)
Length = 900
Score = 959 bits (484), Expect = 0.0
Identities = 487/488 (99%)
Strand = Plus / Plus
Query: 2222 atgaggaaaagcaaaagctaagcacaaacctacagagtttacctccagagaagctggatg 2281
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2 atgaggaaaagcaaaagctaagcacaaacctacagagtttacctccagagaagctggatg 61
Query: 2282 ctattgtgcaaatcattaagaggagaagtttagcacttagtcaacatgatgatgaaattg 2341
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 62 ctattgtgcaaatcattaagaggagaagtttagcacttagtcaacatgatgatgaaattg 121
Query: 2342 aagtggacattgatagtgtagatgctgagactctctgggaactcgatagatttgtgacta 2401
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122 aagtggacattgatagtgtagatgctgagactctctgggaactcgatagatttgtgacta 181
Query: 2402 actataagaaaagtttaagcaaaaacaagaggaaggctgaacttgctcgggctagagcag 2461
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 182 actataagaaaagtttaagcaaaaacaagaggaaggctgaacttgctcgggctagagcag 241
Query: 2462 aagcgttgcagaatgccattgacaagaaccaagcacaagctgttgtagagattcccagag 2521
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 242 aagcgttgcagaatgccattgacaagaaccaagcacaagctgttgtagagattcccagag 301
Query: 2522 actcacaaacagatgaaagaaatgctcccccggtcttgcctgggcaaggtggaattgaag 2581
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 302 actcacaaacagatgaaagaaatgctcccccggtcttgcctgggcaaggtggaattgaag 361
Query: 2582 ccaataatcagagtaggtcaagtagttcaagcagctcaagcagtgattcgggatcttctt 2641
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 362 ccaataatcagagtaggtcaagtagttcaagcagctcaagcagtgattcgggatcttctt 421
Query: 2642 caagcgattctgatagtgatagttcttcagcatctggatcagatgcagagtcgcaaggga 2701
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 422 caagcgattctgatagtgatagttcttcagcgtctggatcagatgcagagtcgcaaggga 481
Query: 2702 cctgaatg 2709
||||||||
Sbjct: 482 cctgaatg 489
>gnl|LJGI|TC67348 similar to UniRef100_A7PJE3 Cluster: Chromosome chr12 scaffold_18,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr12 scaffold_18, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (27%)
Length = 1147
Score = 258 bits (130), Expect = 2e-67
Identities = 403/494 (81%)
Strand = Plus / Plus
Query: 1955 tatttgaggacagatgggctataatagagtcagattacaatcgtgagatgagatatggtg 2014
|||||||||| |||||||||||||| |||||| |||||||||| ||| ||||||||||
Sbjct: 1 tatttgaggaaagatgggctataattgagtcaaattacaatcgggagttgagatatggct 60
Query: 2015 taagttatggggtagcaccccctgcaccttcacctctgtctagaaaggttcctgcatttc 2074
|| ||||||| ||| |||||| ||||||||||||||||||||| || |||||| |
Sbjct: 61 tagaatatggggcagctattcctgcaacttcacctctgtctagaaaggctcatgcattcc 120
Query: 2075 ctcccccgcctcttgatatgagaaggattttggatagatcagaatctttgatacgaactc 2134
|| || ||||||||||||||| ||||||||||||| ||||| || ||| | | ||
Sbjct: 121 gaccaccccctcttgatatgagacggattttggataggtcagagtcaatgacgcaacctt 180
Query: 2135 caaaaaccatgagcattactccatcaagtagaaccccagctccaaaaaagccaaaggcga 2194
||||| |||| | | ||||| ||| ||||||| |||| || ||||||||||| |
Sbjct: 181 caaaacttatgaacgtcactccttcatcccgaacccctgctctgaagaagccaaaggcaa 240
Query: 2195 aggatcctcataaaagagatatgacatatgaggaaaagcaaaagctaagcacaaacctac 2254
|||| | |||| ||||| |||||||||||||||||||| || || |||||| | || |
Sbjct: 241 gagatctttataagagagacatgacatatgaggaaaagcagaaacttagcacacatcttc 300
Query: 2255 agagtttacctccagagaagctggatgctattgtgcaaatcattaagaggagaagtttag 2314
||||| | ||| | |||||||| ||||| || || || |||||||| | ||||| || ||
Sbjct: 301 agagtcttccttctgagaagctagatgccatcgtacagatcattaaaaagagaaattcag 360
Query: 2315 cacttagtcaacatgatgatgaaattgaagtggacattgatagtgtagatgctgagactc 2374
||||| ||||||||||||||||||||||| || ||||||||||| ||| ||| ||||
Sbjct: 361 cactttcccaacatgatgatgaaattgaagttgatattgatagtgtggataatgaaactc 420
Query: 2375 tctgggaactcgatagatttgtgactaactataagaaaagtttaagcaaaaacaagagga 2434
| ||||| || |||||||||||||| |||| |||||||||||| ||||| |||||||| |
Sbjct: 421 tttgggagcttgatagatttgtgaccaactttaagaaaagtttgagcaagaacaagagaa 480
Query: 2435 aggctgaacttgct 2448
||||||||||||||
Sbjct: 481 aggctgaacttgct 494
Score = 85.7 bits (43), Expect = 1e-15
Identities = 70/79 (88%)
Strand = Plus / Plus
Query: 2600 caagtagttcaagcagctcaagcagtgattcgggatcttcttcaagcgattctgatagtg 2659
||||||||||||| |||||| ||||||| || || ||||| ||||| |||||||| ||||
Sbjct: 646 caagtagttcaagtagctcaggcagtgactctggttcttcatcaagtgattctgacagtg 705
Query: 2660 atagttcttcagcatctgg 2678
||||||||||||| |||||
Sbjct: 706 atagttcttcagcgtctgg 724
>gnl|LJGI|BP074682 weakly similar to UniRef100_A7PJE3 Cluster: Chromosome chr12
scaffold_18, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr12 scaffold_18, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (9%)
Length = 484
Score = 85.7 bits (43), Expect = 1e-15
Identities = 70/79 (88%)
Strand = Plus / Plus
Query: 2600 caagtagttcaagcagctcaagcagtgattcgggatcttcttcaagcgattctgatagtg 2659
||||||||||||| |||||| ||||||| || || ||||| ||||| |||||||| ||||
Sbjct: 152 caagtagttcaagtagctcaggcagtgactctggttcttcatcaagtgattctgacagtg 211
Query: 2660 atagttcttcagcatctgg 2678
||||||||||||| |||||
Sbjct: 212 atagttcttcagcgtctgg 230