Miyakogusa Predicted Gene
- Lj0g3v0309389.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0309389.1 Non Chatacterized Hit- tr|I1JWQ0|I1JWQ0_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.10310
PE,57.42,0,seg,NULL; FAMILY NOT NAMED,NULL,gene.g24134.t1.1
(4659 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC81384 similar to UniRef100_A7PDC5 Cluster: Chromosome... 153 1e-35
gnl|LJGI|BU494316 similar to UniRef100_A7PDC5 Cluster: Chromosom... 151 5e-35
gnl|LJGI|TC80930 similar to UniRef100_A7PDC5 Cluster: Chromosome... 90 1e-16
gnl|LJGI|TC76865 similar to UniRef100_A7PDC5 Cluster: Chromosome... 90 1e-16
gnl|LJGI|TC60339 similar to UniRef100_A7PDC4 Cluster: Chromosome... 64 8e-09
gnl|LJGI|TC81040 UniRef100_Q9BBS3 Cluster: ATP synthase subunit ... 60 1e-07
>gnl|LJGI|TC81384 similar to UniRef100_A7PDC5 Cluster: Chromosome chr17 scaffold_12,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr17 scaffold_12, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (7%)
Length = 1204
Score = 153 bits (77), Expect = 1e-35
Identities = 80/81 (98%)
Strand = Plus / Plus
Query: 4488 gaagcgtaaaagtgccacttctgaactactgccatggcataaggaactgacacagggtac 4547
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gaagcgtaaaagtgccacttctgaactactgccatggcataaggaactgacacagggtac 60
Query: 4548 taagaggcttcgagatctcag 4568
||||||||||||| |||||||
Sbjct: 61 taagaggcttcgatatctcag 81
>gnl|LJGI|BU494316 similar to UniRef100_A7PDC5 Cluster: Chromosome chr17 scaffold_12,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr17 scaffold_12, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (3%)
Length = 376
Score = 151 bits (76), Expect = 5e-35
Identities = 169/200 (84%)
Strand = Plus / Plus
Query: 4068 tgatggacataacacaaatgtgacttctcaagaggtggttggatatggtcagaataatgc 4127
|||||||| | |||| |||| ||||||||||||||| |||||||||||||||| |||||
Sbjct: 12 tgatggacgtgacactaatgcaacttctcaagaggtgattggatatggtcagaaaaatgc 71
Query: 4128 acctagtgcttctaatagtaataaaacaatttctgtcagaagaaatcattctctggtaaa 4187
| | || | |||||||||| | | |||||||||||| | | |||| || ||||
Sbjct: 72 tcttcatgttactaatagtaaccacgtgacttctgtcagaagtgaaccttctatgataaa 131
Query: 4188 tcctcaaatggcaccatcatggtttgagcaatatggaacttttaaaaatggtaagatatt 4247
|||||| ||||| |||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 132 tcctcagatggctccatcatggtttgagcaatatggaacttttaaaaatggtaagatgtt 191
Query: 4248 gccgatgtatgatgtacgga 4267
||| |||||||||| |||||
Sbjct: 192 gccaatgtatgatgcacgga 211
>gnl|LJGI|TC80930 similar to UniRef100_A7PDC5 Cluster: Chromosome chr17 scaffold_12,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr17 scaffold_12, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (3%)
Length = 721
Score = 89.7 bits (45), Expect = 1e-16
Identities = 174/217 (80%)
Strand = Plus / Plus
Query: 2477 agggaaatcgaagacctcccctaactcgtaagtttcagtatcatccaatgggagatctgg 2536
|||| |||||||||||| | ||||| ||||| ||||||||||| || ||||| ||| | |
Sbjct: 78 agggcaatcgaagaccttctctaacccgtaaatttcagtatcaccccatgggggatgttg 137
Query: 2537 gtactgaagtggaaccttatggaaaccaacatgtcataaattcacagcatatgcccctta 2596
|| ||| | |||||| | |||||| ||||||||||||||||||||| |||||||| |
Sbjct: 138 gtggtgacatagaacctcagggaaacaaacatgtcataaattcacagcctatgccccatc 197
Query: 2597 cacactttgggggagataatggtcaggaccaaagttatctgggacagtcaaagtatggcc 2656
| || ||| ||| ||| |||||||||||||| |||| || |||||||| ||||| |
Sbjct: 198 atccctatggaggacttaaaggtcaggaccaaagctatcctgggcagtcaaattatggtc 257
Query: 2657 attatgacaggagttatagtgaaatggagaagggtga 2693
||| ||| ||| ||||| |||| |||||||||||
Sbjct: 258 attctgatgggaattatatggaaacagagaagggtga 294
Score = 85.7 bits (43), Expect = 2e-15
Identities = 97/115 (84%)
Strand = Plus / Plus
Query: 2821 actgaatcctctgatggatctgctgtacataatcagtggaatcaaagttcttcatctcag 2880
||||||| ||||||||| ||| ||||||| ||| | |||||||||||||| |||||
Sbjct: 422 actgaatattctgatggacctgttgtacatcctcaacgaaatcaaagttcttcgtctcat 481
Query: 2881 ggatttggcttacaattagctcctcctactcaacggcttcctgtggtatcttctc 2935
|| ||||| ||||||||||||||||| |||||| |||||| | ||| ||||||||
Sbjct: 482 ggctttggtttacaattagctcctcccactcaaaggcttcatatgggatcttctc 536
>gnl|LJGI|TC76865 similar to UniRef100_A7PDC5 Cluster: Chromosome chr17 scaffold_12,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr17 scaffold_12, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (5%)
Length = 819
Score = 89.7 bits (45), Expect = 1e-16
Identities = 174/217 (80%)
Strand = Plus / Plus
Query: 2477 agggaaatcgaagacctcccctaactcgtaagtttcagtatcatccaatgggagatctgg 2536
|||| |||||||||||| | ||||| ||||| ||||||||||| || ||||| ||| | |
Sbjct: 80 agggcaatcgaagaccttctctaacccgtaaatttcagtatcaccccatgggggatgttg 139
Query: 2537 gtactgaagtggaaccttatggaaaccaacatgtcataaattcacagcatatgcccctta 2596
|| ||| | |||||| | |||||| ||||||||||||||||||||| |||||||| |
Sbjct: 140 gtggtgacatagaacctcagggaaacaaacatgtcataaattcacagcctatgccccatc 199
Query: 2597 cacactttgggggagataatggtcaggaccaaagttatctgggacagtcaaagtatggcc 2656
| || ||| ||| ||| |||||||||||||| |||| || |||||||| ||||| |
Sbjct: 200 atccctatggaggacttaaaggtcaggaccaaagctatcctgggcagtcaaattatggtc 259
Query: 2657 attatgacaggagttatagtgaaatggagaagggtga 2693
||| ||| ||| ||||| |||| |||||||||||
Sbjct: 260 attctgatgggaattatatggaaacagagaagggtga 296
Score = 85.7 bits (43), Expect = 2e-15
Identities = 97/115 (84%)
Strand = Plus / Plus
Query: 2821 actgaatcctctgatggatctgctgtacataatcagtggaatcaaagttcttcatctcag 2880
||||||| ||||||||| ||| ||||||| ||| | |||||||||||||| |||||
Sbjct: 520 actgaatattctgatggacctgttgtacatcctcaacgaaatcaaagttcttcgtctcat 579
Query: 2881 ggatttggcttacaattagctcctcctactcaacggcttcctgtggtatcttctc 2935
|| ||||| ||||||||||||||||| |||||| |||||| | ||| ||||||||
Sbjct: 580 ggctttggtttacaattagctcctcccactcaaaggcttcatatgggatcttctc 634
>gnl|LJGI|TC60339 similar to UniRef100_A7PDC4 Cluster: Chromosome chr17 scaffold_12,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr17 scaffold_12, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (30%)
Length = 801
Score = 63.9 bits (32), Expect = 8e-09
Identities = 129/158 (81%), Gaps = 5/158 (3%)
Strand = Plus / Plus
Query: 82 gagcagggatacacaagctctccacatttcat-acatggtttgaacataacacaatcaaa 140
||||||||| |||||||| |||||| ||||| ||||||||||||| || |||||||||
Sbjct: 457 gagcagggacacacaagccctccac-tttcacgacatggtttgaacctaggacaatcaaa 515
Query: 141 tttgaggcctgagtctggc---aatcagctgcaaaaccaacaaagagtcgtgaatggcta 197
| ||||| |||| |||||| ||||| | | |||||| |||| || || ||||||||
Sbjct: 516 tctgaggtctgactctggcaggaatcaacccccaaaccagcaaacagctgttaatggcta 575
Query: 198 tctgcagggacaacaggttttccagactaggcaaaatg 235
| |||| ||||| ||| |||||||| ||||||| ||||
Sbjct: 576 tatgcaaggacatcagattttccagtctaggcacaatg 613
>gnl|LJGI|TC81040 UniRef100_Q9BBS3 Cluster: ATP synthase subunit alpha; n=1; Lotus
japonicus|Rep: ATP synthase subunit alpha - Lotus
japonicus, complete
Length = 2634
Score = 60.0 bits (30), Expect = 1e-07
Identities = 45/50 (90%)
Strand = Plus / Minus
Query: 6 ttctttcagtgccccaaacataccaatattagtggcgatggaacgtaaat 55
|||||||| |||||||||||||||||||||| |||||||| ||| ||||
Sbjct: 543 ttctttcatcgccccaaacataccaatattagcggcgatggtacggaaat 494