Miyakogusa Predicted Gene
- Lj0g3v0308579.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0308579.1 tr|G7JU86|G7JU86_MEDTR Cytosine-specific
methyltransferase OS=Medicago truncatula GN=MTR_4g113420
PE,38.82,2e-18,BAH,Bromo adjacent homology (BAH) domain; DNA
(CYTOSINE-5)-METHYLTRANSFERASE 1 (DNMT1),NULL; CYTOSIN,CUFF.20840.1
(984 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|DC593415 weakly similar to UniRef100_A7P020 Cluster: Cy... 575 e-163
gnl|LJGI|FS332867 weakly similar to UniRef100_Q94F88 Cluster: DN... 387 e-107
>gnl|LJGI|DC593415 weakly similar to UniRef100_A7P020 Cluster: Cytosine-specific
methyltransferase; n=1; Vitis vinifera|Rep:
Cytosine-specific methyltransferase - Vitis vinifera
(Grape), partial (14%)
Length = 592
Score = 575 bits (290), Expect = e-163
Identities = 410/450 (91%)
Strand = Plus / Plus
Query: 222 ctggcctcaccggtaccaggagaagaagcaatctgctaggtcaaagtcaagcagtgatga 281
||||||||| ||||||| |||||||||||||| |||||||||||| |||| |||||||||
Sbjct: 143 ctggcctcatcggtacctggagaagaagcaatttgctaggtcaaattcaaacagtgatga 202
Query: 282 tgatattctccaagctcgtcggcactatagagaggcagaagtagatgggtctacgcttta 341
||||||||| ||||||||||||||||| | ||||||||||||||||||||||||||||||
Sbjct: 203 tgatattcttcaagctcgtcggcactacatagaggcagaagtagatgggtctacgcttta 262
Query: 342 caaactttatgacgatgcccatgttaaagcagaggaaggagatgacaattacatttgtaa 401
||||||||| || ||||||||||| ||||||||||||||||| |||| ||| ||||||||
Sbjct: 263 caaactttacgatgatgcccatgtaaaagcagaggaaggagaggacagttatatttgtaa 322
Query: 402 aattgtggagatgtttgaggcatgtgatgggaccttacatttcactgcacaatggtacta 461
||| | |||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 323 aatcattgagatgtttgaggcatttgatgggaccttacatttcactgcacaatggtacta 382
Query: 462 tagagcaaaagacactgtcattaaaaaccttgcctttcttattgaagaaccaaggcgaat 521
||||||||| ||||| ||||||||||| ||||| ||||| ||||| |||||||| ||| |
Sbjct: 383 tagagcaaaggacacagtcattaaaaatcttgcatttctaattgacgaaccaagacgagt 442
Query: 522 tttttattcagaagttaaggatgacaatccactggattgtcttttagaaaagttaaacat 581
||||||||||||||||||||||||||||||| ||||||||||| | | |||||| |||||
Sbjct: 443 tttttattcagaagttaaggatgacaatccattggattgtcttattgcaaagttgaacat 502
Query: 582 tgcaagagtgacgttaaatgtggatttggcggaaaaggagaaaactattccactatgtga 641
||| ||||| | |||||||||||||||||| ||||||||||||||||||||| |||||
Sbjct: 503 tgccagagtttcactaaatgtggatttggcggcaaaggagaaaactattccactctgtga 562
Query: 642 ttattactgtgacacccagtatattttgcc 671
|||||| |||||||| ||||||||||||||
Sbjct: 563 ttattattgtgacacacagtatattttgcc 592
>gnl|LJGI|FS332867 weakly similar to UniRef100_Q94F88 Cluster: DNA
(cytosine-5)-methyltransferase CMT3; n=1; Arabidopsis
thaliana|Rep: DNA (cytosine-5)-methyltransferase CMT3 -
Arabidopsis thaliana (Mouse-ear cress), partial (7%)
Length = 615
Score = 387 bits (195), Expect = e-107
Identities = 267/291 (91%)
Strand = Plus / Plus
Query: 177 cagattcgtcggagatccagtccctgccgaggaagcaaggcagcactggcctcaccggta 236
||||||| |||||||||||||||||| |||||||| |||| || ||||||||| |||||
Sbjct: 325 cagattcatcggagatccagtccctgatgaggaagctaggcggcgctggcctcatcggta 384
Query: 237 ccaggagaagaagcaatctgctaggtcaaagtcaagcagtgatgatgatattctccaagc 296
|| |||||||||||||| |||||||||||| |||| |||||||||||||||||| |||||
Sbjct: 385 cctggagaagaagcaatttgctaggtcaaattcaaacagtgatgatgatattcttcaagc 444
Query: 297 tcgtcggcactatagagaggcagaagtagatgggtctacgctttacaaactttatgacga 356
|||||||||||| | ||||||||||||||||||||||||||||||||||||||| || ||
Sbjct: 445 tcgtcggcactacatagaggcagaagtagatgggtctacgctttacaaactttacgatga 504
Query: 357 tgcccatgttaaagcagaggaaggagatgacaattacatttgtaaaattgtggagatgtt 416
||||||||| ||||||||||||||||| |||| ||| ||||||||||| | ||||||||
Sbjct: 505 tgcccatgtaaaagcagaggaaggagaggacagttatatttgtaaaatcattgagatgtt 564
Query: 417 tgaggcatgtgatgggaccttacatttcactgcacaatggtactatagagc 467
|||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 tgaggcatttgatgggaccttacatttcactgcacaatggtactatagagc 615
Score = 89.7 bits (45), Expect = 3e-17
Identities = 78/89 (87%)
Strand = Plus / Plus
Query: 45 tgcttcctccggcgaggctccgaacaagtcaaggagaaagacgaatcggaagagttccgc 104
|||||||||||||||| ||||||||||||||||||||||| |||||| || | | | ||
Sbjct: 7 tgcttcctccggcgagtctccgaacaagtcaaggagaaaggcgaatccaaacactcctgc 66
Query: 105 agctgaatcagctcctgctgccgtcgaaa 133
|| |||||||||| || ||||||||||||
Sbjct: 67 agttgaatcagcttctcctgccgtcgaaa 95
Score = 81.8 bits (41), Expect = 7e-15
Identities = 59/65 (90%)
Strand = Plus / Plus
Query: 45 tgcttcctccggcgaggctccgaacaagtcaaggagaaagacgaatcggaagagttccgc 104
|||||||||||||||| ||| ||||||||||||||| ||| |||||||||||||| | ||
Sbjct: 169 tgcttcctccggcgagtctctgaacaagtcaaggaggaagtcgaatcggaagagtcctgc 228
Query: 105 agctg 109
|||||
Sbjct: 229 agctg 233