Miyakogusa Predicted Gene

Lj0g3v0308519.1
Show Alignment: 

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0308519.1 Non Chatacterized Hit- tr|I1JB43|I1JB43_SOYBN
Uncharacterized protein (Fragment) OS=Glycine max
PE=4,90.09,0,DEAD-like helicases superfamily,Helicase, superfamily
1/2, ATP-binding domain; coiled-coil,NULL; AAA,CUFF.20843.1
         (1302 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|BP065361 similar to UniRef100_A7PAY3 Cluster: Chromosom...   289   2e-77

>gnl|LJGI|BP065361 similar to UniRef100_A7PAY3 Cluster: Chromosome chr16 scaffold_10,
            whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
            Chromosome chr16 scaffold_10, whole genome shotgun
            sequence - Vitis vinifera (Grape), partial (11%)
          Length = 442

 Score =  289 bits (146), Expect = 2e-77
 Identities = 177/186 (95%), Gaps = 1/186 (0%)
 Strand = Plus / Plus

                                                                        
Query: 1117 acacaataccgtatgaacaatgcaattgctagctgggcttcaaaggagatgtatggaggc 1176
            ||||| ||| |||||||||||| ||| ||||| |||||||||||||||||||||||||||
Sbjct: 1    acacactactgtatgaacaatgtaat-gctagttgggcttcaaaggagatgtatggaggc 59

                                                                        
Query: 1177 ttgttgaagtcctctaagactgtgttttctcatcttcttgtagactctccttttgttcag 1236
            ||||||||||||| |||||||||||||||||||||||||||||||| ||| |||||||||
Sbjct: 60   ttgttgaagtcctttaagactgtgttttctcatcttcttgtagactttccgtttgttcag 119

                                                                        
Query: 1237 cctacatggataacacagtgcccactgctattgcttgatactagaatgccatatgaaagt 1296
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 120  cctacatggataacacagtgcccactgctattgcttgatactagaatgccatatgaaagt 179

                  
Query: 1297 ctgtct 1302
             |||||
Sbjct: 180  atgtct 185