Miyakogusa Predicted Gene
- Lj0g3v0308169.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0308169.1 tr|A9S8E7|A9S8E7_PHYPA Predicted protein
(Fragment) OS=Physcomitrella patens subsp. patens
GN=PHYPAD,66.67,4e-19,seg,NULL,CUFF.20797.1
(432 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC76989 homologue to UniRef100_A7Q1G1 Cluster: Chromoso... 841 0.0
gnl|LJGI|TC59709 similar to UniRef100_A7Q1G1 Cluster: Chromosome... 484 e-136
>gnl|LJGI|TC76989 homologue to UniRef100_A7Q1G1 Cluster: Chromosome chr7 scaffold_44,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr7 scaffold_44, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (26%)
Length = 729
Score = 841 bits (424), Expect = 0.0
Identities = 430/432 (99%)
Strand = Plus / Plus
Query: 1 atggcgttagcgttcggttcagtaactcctaattccaacaacactttctatctcactctc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 65 atggcgttagcgttcggttcagtaactcctaattccaacaacactttctatctcactctc 124
Query: 61 actcttccaaaatcaccacctcgcaacctcatcaacaatcaccgtaattttttcagtggc 120
||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 125 actcttccaaaatcaccgtctcgcaacctcatcaacaatcaccgtaattttttcagtggc 184
Query: 121 aacaaaggtgtcagctatggtcacaatctgttctatacagacccaagaactagaagagct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 185 aacaaaggtgtcagctatggtcacaatctgttctatacagacccaagaactagaagagct 244
Query: 181 tcccttgccactattctctgttctgcttccaataagccatcaccatcttcctctgaaatt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 245 tcccttgccactattctctgttctgcttccaataagccatcaccatcttcctctgaaatt 304
Query: 241 agctggctagatgaacaaaagaagttggcgggtgtgtcctctgagtctccagtgtatcta 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 305 agctggctagatgaacaaaagaagttggcgggtgtgtcctctgagtctccagtgtatcta 364
Query: 301 tctctacgtctggatggtcgtgttcgtggcagtggtgttggttatcctccttggaatgct 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 365 tctctacgtctggatggtcgtgttcgtggcagtggtgttggttatcctccttggaatgct 424
Query: 361 ttcgttgctcaattaccaccagtaaagggaatgtggactggactactagatggttttgat 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 425 ttcgttgctcaattaccaccagtaaagggaatgtggactggactactagatggttttgat 484
Query: 421 ggtagagtttag 432
||||||||||||
Sbjct: 485 ggtagagtttag 496
>gnl|LJGI|TC59709 similar to UniRef100_A7Q1G1 Cluster: Chromosome chr7 scaffold_44,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr7 scaffold_44, whole genome shotgun
sequence - Vitis vinifera (Grape), complete
Length = 1253
Score = 484 bits (244), Expect = e-136
Identities = 244/244 (100%)
Strand = Plus / Plus
Query: 1 atggcgttagcgttcggttcagtaactcctaattccaacaacactttctatctcactctc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 50 atggcgttagcgttcggttcagtaactcctaattccaacaacactttctatctcactctc 109
Query: 61 actcttccaaaatcaccacctcgcaacctcatcaacaatcaccgtaattttttcagtggc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 110 actcttccaaaatcaccacctcgcaacctcatcaacaatcaccgtaattttttcagtggc 169
Query: 121 aacaaaggtgtcagctatggtcacaatctgttctatacagacccaagaactagaagagct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 170 aacaaaggtgtcagctatggtcacaatctgttctatacagacccaagaactagaagagct 229
Query: 181 tcccttgccactattctctgttctgcttccaataagccatcaccatcttcctctgaaatt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 230 tcccttgccactattctctgttctgcttccaataagccatcaccatcttcctctgaaatt 289
Query: 241 agct 244
||||
Sbjct: 290 agct 293
Score = 377 bits (190), Expect = e-104
Identities = 190/190 (100%)
Strand = Plus / Plus
Query: 243 ctggctagatgaacaaaagaagttggcgggtgtgtcctctgagtctccagtgtatctatc 302
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 865 ctggctagatgaacaaaagaagttggcgggtgtgtcctctgagtctccagtgtatctatc 924
Query: 303 tctacgtctggatggtcgtgttcgtggcagtggtgttggttatcctccttggaatgcttt 362
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 925 tctacgtctggatggtcgtgttcgtggcagtggtgttggttatcctccttggaatgcttt 984
Query: 363 cgttgctcaattaccaccagtaaagggaatgtggactggactactagatggttttgatgg 422
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 985 cgttgctcaattaccaccagtaaagggaatgtggactggactactagatggttttgatgg 1044
Query: 423 tagagtttag 432
||||||||||
Sbjct: 1045 tagagtttag 1054