Miyakogusa Predicted Gene

Lj0g3v0308159.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0308159.1 tr|A9SPD7|A9SPD7_PHYPA Predicted protein
OS=Physcomitrella patens subsp. patens
GN=PHYPADRAFT_133111,75.86,1e-17,PSI_PsaE,Photosystem I PsaE, reaction
centre subunit IV; no description,NULL;
PSAE_SPIOL_P12354;,Pho,CUFF.20854.1
         (336 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC64921 similar to UniRef100_A8C1A6 Cluster: PSI reacti...   440   e-123

>gnl|LJGI|TC64921 similar to UniRef100_A8C1A6 Cluster: PSI reaction center subunit
           III precursor; n=1; Citrus sinensis|Rep: PSI reaction
           center subunit III precursor - Citrus sinensis (Sweet
           orange), partial (72%)
          Length = 666

 Score =  440 bits (222), Expect = e-123
 Identities = 222/222 (100%)
 Strand = Plus / Plus

                                                                       
Query: 115 gccactcctacggcggagggtgatgcagctccaaagcccaagccaccaccaattggcccc 174
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 gccactcctacggcggagggtgatgcagctccaaagcccaagccaccaccaattggcccc 323

                                                                       
Query: 175 aagagaggttctaaggtgaagattcttaggaaggaatcctactggtacaaaggcactggt 234
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 aagagaggttctaaggtgaagattcttaggaaggaatcctactggtacaaaggcactggt 383

                                                                       
Query: 235 tcagtagttgctgttgatcaggaccccaagactcgctaccctgttgtggttcgattcaac 294
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 tcagtagttgctgttgatcaggaccccaagactcgctaccctgttgtggttcgattcaac 443

                                                     
Query: 295 aaggtgaactatgcaaatgtatcaacaaacaattatgctctg 336
           ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 aaggtgaactatgcaaatgtatcaacaaacaattatgctctg 485



 Score =  101 bits (51), Expect = 3e-21
 Identities = 54/55 (98%)
 Strand = Plus / Plus

                                                                  
Query: 1   atgaagctgctgcacccgccaccgccactcctacggcggagggggatgcagctcc 55
           ||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 241 atgaagctgctgcacccgccaccgccactcctacggcggagggtgatgcagctcc 295