Miyakogusa Predicted Gene

Lj0g3v0308129.1
Show Alignment: 

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0308129.1 Non Chatacterized Hit- tr|K4CQ65|K4CQ65_SOLLC
Uncharacterized protein OS=Solanum lycopersicum
GN=Sol,27.55,1e-17,DUF4378,Domain of unknown function DUF4378;
DUF3741,Protein of unknown function DUF3741; VARLMGL,NUL,CUFF.20795.1
         (2538 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC80299                                                      688   0.0  
gnl|LJGI|TC69294 similar to UniRef100_A7Q1F9 Cluster: Chromosome...   109   9e-23

>gnl|LJGI|TC80299 
          Length = 508

 Score =  688 bits (347), Expect = 0.0
 Identities = 350/351 (99%)
 Strand = Plus / Plus

                                                                        
Query: 2188 tttgtcaatgctgcactgttagaaattggttatgatggaccagagaatcacttaaagagg 2247
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1    tttgtcaatgctgcactgttagaaattggttatgatggaccagagaatcacttaaagagg 60

                                                                        
Query: 2248 agaatgtacagtgggagccacttcaggcccctagtagtgaagcaagagtgtggtggatct 2307
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61   agaatgtacagtgggagccacttcaggcccctagtagtgaagcaagagtgtggtggatct 120

                                                                        
Query: 2308 cctcccattttggtggaccacattgtgggccaaatgaaggagttaatgtgggaggattgt 2367
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121  cctcccattttggtggaccacattgtgggccaaatgaaggagttaatgtgggaggattgt 180

                                                                        
Query: 2368 ggggacaaccacagcctggtggtagagagtgttgttaggaaagaagctgtgaaggtgggg 2427
            |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181  ggggacaaccccagcctggtggtagagagtgttgttaggaaagaagctgtgaaggtgggg 240

                                                                        
Query: 2428 tgggttgagcttatgaggttggagattgatgttttggggagtgagatagaggggaagttg 2487
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241  tgggttgagcttatgaggttggagattgatgttttggggagtgagatagaggggaagttg 300

                                                               
Query: 2488 atacaagagcttgtggaaaatgctgtggttgatttaacaggaagagcctga 2538
            |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301  atacaagagcttgtggaaaatgctgtggttgatttaacaggaagagcctga 351


>gnl|LJGI|TC69294 similar to UniRef100_A7Q1F9 Cluster: Chromosome chr7 scaffold_44,
            whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
            Chromosome chr7 scaffold_44, whole genome shotgun
            sequence - Vitis vinifera (Grape), partial (24%)
          Length = 1213

 Score =  109 bits (55), Expect = 9e-23
 Identities = 290/368 (78%), Gaps = 9/368 (2%)
 Strand = Plus / Plus

                                                                        
Query: 1834 ctgaagtccaatttaattgacaaatcaccacctatagaatcagtatctaggaccctgtca 1893
            |||||||| ||||||||||||||||||||||||||||||||| || || | ||||| |||
Sbjct: 305  ctgaagtctaatttaattgacaaatcaccacctatagaatcaatagctcgaaccctctca 364

                                                                        
Query: 1894 tggcatgattcttgtgaagacgtagcaagttcttattctgtaaaatcct------cttca 1947
            ||| ||||||| |||| ||| ||||| ||||| ||| |  ||||  | |      |||| 
Sbjct: 365  tgggatgattcatgtgcagaggtagctagttcatatccattaaagccttcgttggcttcc 424

                                                                        
Query: 1948 ttagacaccaaggtagaggggcaggagtggattctattggtccagaaactactatcagca 2007
            | |||||||| ||||||||  || || | | || | || ||  |||||||||||||||| 
Sbjct: 425  tcagacaccatggtagaggatcaagacttgcttgtttttgtggagaaactactatcagct 484

                                                                        
Query: 2008 gcaggacttgatgatcaagaaaattgcaactcatttcacactagatggcattccactgaa 2067
            || ||||||||||||||||   |     | |||||| || ||||||||||||||  ||||
Sbjct: 485  gctggacttgatgatcaagtgcagcctgattcattttactctagatggcattcccttgaa 544

                                                                        
Query: 2068 agcccattggatccttcactgagggacacatatgccaacatgaatgacaacaaggaccct 2127
            ||||||||| |||| ||  ||||||||| |||||||||  | ||||   |||| || || 
Sbjct: 545  agcccattgaatccatcgttgagggacaaatatgccaatctcaatg---acaaagagccc 601

                                                                        
Query: 2128 tggactctccatgaggccaggagaaggaagatgagatcaaatcagaagcttgtgtttgac 2187
              | |||||||||| |||| ||||||| ||| |||||| |||||||||||||| ||||| 
Sbjct: 602  cagcctctccatgaagccaagagaaggcagaggagatctaatcagaagcttgtatttgat 661

                    
Query: 2188 tttgtcaa 2195
            | ||||||
Sbjct: 662  tgtgtcaa 669



 Score = 95.6 bits (48), Expect = 1e-18
 Identities = 84/96 (87%)
 Strand = Plus / Plus

                                                                        
Query: 1681 gagcctggattgactgaatcaaagccaatggtgccagagatatcaagtgaaaaccaggat 1740
            ||||| |||||||| |  |||||||| ||||||||   ||| ||||||||||||||||||
Sbjct: 137  gagccaggattgaccgtgtcaaagcccatggtgccctggatttcaagtgaaaaccaggat 196

                                                
Query: 1741 cagccaagtccaatctcagtgttagaaactccattt 1776
            ||||| |||||||||||||| |||||| ||||||||
Sbjct: 197  cagccgagtccaatctcagttttagaacctccattt 232