Miyakogusa Predicted Gene
- Lj0g3v0308129.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0308129.1 Non Chatacterized Hit- tr|K4CQ65|K4CQ65_SOLLC
Uncharacterized protein OS=Solanum lycopersicum
GN=Sol,27.55,1e-17,DUF4378,Domain of unknown function DUF4378;
DUF3741,Protein of unknown function DUF3741; VARLMGL,NUL,CUFF.20795.1
(2538 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC80299 688 0.0
gnl|LJGI|TC69294 similar to UniRef100_A7Q1F9 Cluster: Chromosome... 109 9e-23
>gnl|LJGI|TC80299
Length = 508
Score = 688 bits (347), Expect = 0.0
Identities = 350/351 (99%)
Strand = Plus / Plus
Query: 2188 tttgtcaatgctgcactgttagaaattggttatgatggaccagagaatcacttaaagagg 2247
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tttgtcaatgctgcactgttagaaattggttatgatggaccagagaatcacttaaagagg 60
Query: 2248 agaatgtacagtgggagccacttcaggcccctagtagtgaagcaagagtgtggtggatct 2307
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 agaatgtacagtgggagccacttcaggcccctagtagtgaagcaagagtgtggtggatct 120
Query: 2308 cctcccattttggtggaccacattgtgggccaaatgaaggagttaatgtgggaggattgt 2367
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 cctcccattttggtggaccacattgtgggccaaatgaaggagttaatgtgggaggattgt 180
Query: 2368 ggggacaaccacagcctggtggtagagagtgttgttaggaaagaagctgtgaaggtgggg 2427
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 ggggacaaccccagcctggtggtagagagtgttgttaggaaagaagctgtgaaggtgggg 240
Query: 2428 tgggttgagcttatgaggttggagattgatgttttggggagtgagatagaggggaagttg 2487
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 tgggttgagcttatgaggttggagattgatgttttggggagtgagatagaggggaagttg 300
Query: 2488 atacaagagcttgtggaaaatgctgtggttgatttaacaggaagagcctga 2538
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 atacaagagcttgtggaaaatgctgtggttgatttaacaggaagagcctga 351
>gnl|LJGI|TC69294 similar to UniRef100_A7Q1F9 Cluster: Chromosome chr7 scaffold_44,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr7 scaffold_44, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (24%)
Length = 1213
Score = 109 bits (55), Expect = 9e-23
Identities = 290/368 (78%), Gaps = 9/368 (2%)
Strand = Plus / Plus
Query: 1834 ctgaagtccaatttaattgacaaatcaccacctatagaatcagtatctaggaccctgtca 1893
|||||||| ||||||||||||||||||||||||||||||||| || || | ||||| |||
Sbjct: 305 ctgaagtctaatttaattgacaaatcaccacctatagaatcaatagctcgaaccctctca 364
Query: 1894 tggcatgattcttgtgaagacgtagcaagttcttattctgtaaaatcct------cttca 1947
||| ||||||| |||| ||| ||||| ||||| ||| | |||| | | ||||
Sbjct: 365 tgggatgattcatgtgcagaggtagctagttcatatccattaaagccttcgttggcttcc 424
Query: 1948 ttagacaccaaggtagaggggcaggagtggattctattggtccagaaactactatcagca 2007
| |||||||| |||||||| || || | | || | || || ||||||||||||||||
Sbjct: 425 tcagacaccatggtagaggatcaagacttgcttgtttttgtggagaaactactatcagct 484
Query: 2008 gcaggacttgatgatcaagaaaattgcaactcatttcacactagatggcattccactgaa 2067
|| |||||||||||||||| | | |||||| || |||||||||||||| ||||
Sbjct: 485 gctggacttgatgatcaagtgcagcctgattcattttactctagatggcattcccttgaa 544
Query: 2068 agcccattggatccttcactgagggacacatatgccaacatgaatgacaacaaggaccct 2127
||||||||| |||| || ||||||||| ||||||||| | |||| |||| || ||
Sbjct: 545 agcccattgaatccatcgttgagggacaaatatgccaatctcaatg---acaaagagccc 601
Query: 2128 tggactctccatgaggccaggagaaggaagatgagatcaaatcagaagcttgtgtttgac 2187
| |||||||||| |||| ||||||| ||| |||||| |||||||||||||| |||||
Sbjct: 602 cagcctctccatgaagccaagagaaggcagaggagatctaatcagaagcttgtatttgat 661
Query: 2188 tttgtcaa 2195
| ||||||
Sbjct: 662 tgtgtcaa 669
Score = 95.6 bits (48), Expect = 1e-18
Identities = 84/96 (87%)
Strand = Plus / Plus
Query: 1681 gagcctggattgactgaatcaaagccaatggtgccagagatatcaagtgaaaaccaggat 1740
||||| |||||||| | |||||||| |||||||| ||| ||||||||||||||||||
Sbjct: 137 gagccaggattgaccgtgtcaaagcccatggtgccctggatttcaagtgaaaaccaggat 196
Query: 1741 cagccaagtccaatctcagtgttagaaactccattt 1776
||||| |||||||||||||| |||||| ||||||||
Sbjct: 197 cagccgagtccaatctcagttttagaacctccattt 232