Miyakogusa Predicted Gene

Lj0g3v0308069.2

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0308069.2 Non Chatacterized Hit- tr|J3MXH8|J3MXH8_ORYBR
Uncharacterized protein OS=Oryza brachyantha
GN=OB09G1,40.59,0.000000000006,OS11G0103400 PROTEIN,NULL; ARIADNE RING
ZINC FINGER,NULL; ZF_RING_2,Zinc finger, RING-type; Ring
fin,CUFF.20789.2
         (747 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC63284 weakly similar to UniRef100_Q1PEQ5 Cluster: Zin...   400   e-111
gnl|LJGI|TC80253                                                       84   1e-15
gnl|LJGI|TC62242                                                       74   1e-12

>gnl|LJGI|TC63284 weakly similar to UniRef100_Q1PEQ5 Cluster: Zinc finger protein-like
            protein; n=1; Arabidopsis thaliana|Rep: Zinc finger
            protein-like protein - Arabidopsis thaliana (Mouse-ear
            cress), partial (23%)
          Length = 1338

 Score =  400 bits (202), Expect = e-111
 Identities = 511/612 (83%), Gaps = 4/612 (0%)
 Strand = Plus / Plus

                                                                        
Query: 126  ttgcttatgcggtatttgctttgatcacaaaaaggaaactgaaatgttcagaggaagcaa 185
            ||||||||||||||| ||||| ||| |||| || ||  |||||||||||||||| |||||
Sbjct: 391  ttgcttatgcggtatatgcttcgattacaagaaagattctgaaatgttcagagggagcaa 450

                                                                        
Query: 186  gtgcaaccaccccttttgcgctgattgcatatccaagcatgtcgctgctcagattcaaca 245
            |||| | |||||||||||| |||||||||| || ||||||||||||||||| ||||| ||
Sbjct: 451  gtgcgaacaccccttttgctctgattgcatttctaagcatgtcgctgctcaaattcagca 510

                                                                        
Query: 246  aaatgctctcaaggtgaattgtccaaagcctaattgcggtgtcgaattggagccggagta 305
            ||||  ||||||||||||||||||||| ||||||||||  |||||||||| ||||||  |
Sbjct: 511  aaataatctcaaggtgaattgtccaaaccctaattgcgacgtcgaattggggccggaaca 570

                                                                        
Query: 306  tttgaacccgattttgcctgaagaagtcattgttcgattggaatccgcgaggtgcgagtc 365
            |||||||| |||||||||| |||||||  || || ||| ||||||   |||||| |||||
Sbjct: 571  tttgaacctgattttgcctaaagaagttgtttttagatgggaatcattgaggtgtgagtc 630

                                                                        
Query: 366  tttgatcgcggggttgcggaagacttattgcccatttaaggattgttctgttttgttggt 425
            |||||| || |||||||  |||| ||||||||| |||||| |||| || |||||| ||||
Sbjct: 631  tttgattgctgggttgcaaaagagttattgcccctttaagaattgctcagttttgatggt 690

                                                                        
Query: 426  ggatgatgggggtgaagttgtgactgctgctgagtgcccctcttgccataggttgttttg 485
            |||||||||||||||| |||||||   |||||||||||| |||||||| ||| |||| ||
Sbjct: 691  ggatgatgggggtgaaattgtgaccaatgctgagtgcccttcttgccacaggctgttctg 750

                                                                        
Query: 486  tgctcagtgtttggttccgtggcacgcggggttgaattgtaaggagtacttggcgcctgc 545
            ||| || ||| ||||||| ||||| || ||| |||||||| |||| |    |  | ||| 
Sbjct: 751  tgcacaatgtatggttccttggcatgcagggatgaattgtgaggaatttcagaagtctg- 809

                                                                        
Query: 546  tgatagg--aaagttgagaaggatttagataggaagtttcttgatttggctaaaaatagc 603
             ||  ||  |||| |||  | |||||||| | |||||||||  | ||||||||||  |  
Sbjct: 810  -gaagggtaaaaggtgaagaagatttagagaagaagtttctgaagttggctaaaagaaaa 868

                                                                        
Query: 604  atgtggcagagatgccccaaatgcaacttctatgtccaaagaagtagtggatgtgaacac 663
            | ||||||||| || |||||||||| |||||||||||||||||| |||||||||||||||
Sbjct: 869  aagtggcagaggtgtcccaaatgcagcttctatgtccaaagaagaagtggatgtgaacac 928

                                                                        
Query: 664  atggcttgcaggtgtggatgcaacttctgctaccactgtgggaaggattgggtgcatgga 723
            |||   ||||||||||||||||||||||| ||| | ||||| |||||||||  |||||||
Sbjct: 929  atgaaatgcaggtgtggatgcaacttctgttacgaatgtggcaaggattggaagcatgga 988

                        
Query: 724  catatatgtgat 735
            ||||||||||||
Sbjct: 989  catatatgtgat 1000


>gnl|LJGI|TC80253 
          Length = 556

 Score = 83.8 bits (42), Expect = 1e-15
 Identities = 63/70 (90%)
 Strand = Plus / Plus

                                                                       
Query: 678 tggatgcaacttctgctaccactgtgggaaggattgggtgcatggacatatatgtgatca 737
           ||||||||||||||||||| || |||||||||||||   ||||||||||||||||||  |
Sbjct: 187 tggatgcaacttctgctacaacagtgggaaggattgaaggcatggacatatatgtgacaa 246

                     
Query: 738 accttagtcc 747
           ||||||||||
Sbjct: 247 accttagtcc 256


>gnl|LJGI|TC62242 
          Length = 793

 Score = 73.8 bits (37), Expect = 1e-12
 Identities = 55/61 (90%)
 Strand = Plus / Plus

                                                                       
Query: 687 cttctgctaccactgtgggaaggattgggtgcatggacatatatgtgatcaaccttagtc 746
           ||||||||||  ||||||||||||||  ||||||||||||||||||||  ||||||||||
Sbjct: 728 cttctgctacagctgtgggaaggattccgtgcatggacatatatgtgacaaaccttagtc 787

            
Query: 747 c 747
           |
Sbjct: 788 c 788



 Score = 58.0 bits (29), Expect = 8e-08
 Identities = 35/37 (94%)
 Strand = Plus / Plus

                                                
Query: 640 caaagaagtagtggatgtgaacacatggcttgcaggt 676
           |||||||||||||||| |||||||||||||| |||||
Sbjct: 543 caaagaagtagtggatatgaacacatggctttcaggt 579