Miyakogusa Predicted Gene

Lj0g3v0307769.1

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0307769.1 Non Chatacterized Hit- tr|I3SWY0|I3SWY0_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2 SV=1,96.79,0,WD40
repeat-like,WD40-repeat-containing domain; seg,NULL; SUBFAMILY NOT
NAMED,NULL; NUCLEASE-RELATED,CUFF.20768.1
         (660 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC79717 similar to UniRef100_A7QAR8 Cluster: Chromosome...  1261   0.0  
gnl|LJGI|AU089136 similar to UniRef100_A7QAR8 Cluster: Chromosom...   258   4e-68

>gnl|LJGI|TC79717 similar to UniRef100_A7QAR8 Cluster: Chromosome chr5 scaffold_72,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr5 scaffold_72, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (68%)
          Length = 1312

 Score = 1261 bits (636), Expect = 0.0
 Identities = 654/660 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgcctgctaaagcaactctgtttgacaagaactgcaatcctctactggagcttggaact 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 333 atgcctgctaaagcaactctgtttgacaagaactgcaatcctctactggagcttggaact 392

                                                                       
Query: 61  ggtccttacaatactattcgatggaatccaaagggaagatttttatgtttggctggcttt 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 393 ggtccttacaatactattcgatggaatccaaagggaagatttttatgtttggctggcttt 452

                                                                       
Query: 121 ggtaacttacctggtgatatggtgttctgggattacgcggataagaaacagctcgcagca 180
           ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 453 ggtaacttacctggtgacatggtgttctgggattacgcggataagaaacagctcgcagca 512

                                                                       
Query: 181 actaaggttgaatggtctgttacaagtgaatggtctccggatgggtgctatttcatgaca 240
           ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 513 actaaggctgaatggtctgttacaagtgaatggtctccggatgggtgctatttcatgaca 572

                                                                       
Query: 241 gcgacaacagctccgaggcttcaagttgacaatgggatcaagatttttcactacaatgga 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 573 gcgacaacagctccgaggcttcaagttgacaatgggatcaagatttttcactacaatgga 632

                                                                       
Query: 301 tcattgtacttcaagaagatgtttgacaagttgttccaggctgattggaaaccagagtcg 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 633 tcattgtacttcaagaagatgtttgacaagttgttccaggctgattggaaaccagagtcg 692

                                                                       
Query: 361 ccaagtaagtttggtgacatcgctgaattaatcaagtctatagactctgtaaaacttgaa 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 693 ccaagtaagtttggtgacatcgctgaattaatcaagtctatagactctgtaaaacttgaa 752

                                                                       
Query: 421 gataaaaaaccatcaggtcaaggaccaaaacctacccaggcttctacaaaagcctcatct 480
           |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 753 gataaaaaaccatcaggtcaaggaccaaaacctacccaggctgctacaaaagcctcatct 812

                                                                       
Query: 481 gccaacccccctgcgcaaaaacccgctgcctattgcccaccacttgctaagactgcagct 540
           ||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||
Sbjct: 813 gccaacccccctgcgcaaaaacccgctgcctatcgcccaccacatgctaagactgcagct 872

                                                                       
Query: 541 gttattcaggcacagctacttggagagagcccttcagaaacattgagcaagaatgcttta 600
           ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 873 gttatacaggcacagctacttggagagagcccttcagaaacattgagcaagaatgcttta 932

                                                                       
Query: 601 cgaaacaaggaaaaaagggagaagaaaaaggcggctacagatgccagttcttcatgattg 660
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 933 cgaaacaaggaaaaaagggagaagaaaaaggcggctacagatgccagttcttcatgattg 992


>gnl|LJGI|AU089136 similar to UniRef100_A7QAR8 Cluster: Chromosome chr5 scaffold_72,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr5 scaffold_72, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (9%)
          Length = 334

 Score =  258 bits (130), Expect = 4e-68
 Identities = 155/163 (95%), Gaps = 1/163 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgcctgctaaagcaactctgtttgacaagaactgcaatcctctactggagcttggaact 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 134 atgcctgctaaagcaactctgtttgacaagaactgcaatcctctactggagcttggaact 193

                                                                       
Query: 61  ggtccttacaatactattcgatggaatccaaagggaagatttttatgtttggctggc-tt 119
           |||||||||||||||||||||||||||||| |||||| || ||||||| |||||||| ||
Sbjct: 194 ggtccttacaatactattcgatggaatccatagggaatatntttatgtntggctggcttt 253

                                                      
Query: 120 tggtaacttacctggtgatatggtgttctgggattacgcggat 162
           |||||||||||||| |||||| |||| ||||||||||||||||
Sbjct: 254 tggtaacttacctgctgatatngtgtcctgggattacgcggat 296