Miyakogusa Predicted Gene
- Lj0g3v0307699.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0307699.1 tr|Q70KT0|Q70KT0_ORYSJ NF protein (Fragment)
OS=Oryza sativa subsp. japonica PE=2 SV=1,42,5e-16,SUBFAMILY NOT
NAMED,NULL; AMP-ACTIVATED PROTEIN KINASE, GAMMA REGULATORY
SUBUNIT,NULL; no descriptio,CUFF.20757.1
(630 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC75388 similar to UniRef100_Q84PE0 Cluster: AKIN betag... 252 2e-66
>gnl|LJGI|TC75388 similar to UniRef100_Q84PE0 Cluster: AKIN betagamma; n=1; Medicago
truncatula|Rep: AKIN betagamma - Medicago truncatula
(Barrel medic), partial (88%)
Length = 1892
Score = 252 bits (127), Expect = 2e-66
Identities = 457/567 (80%)
Strand = Plus / Plus
Query: 28 gtatttgaagtcctttgcagcttaatccctggatatcatcagtacaatttctatgtggac 87
|||||| |||| |||| ||||||| || |||||||| |||||||| || |||||||
Sbjct: 727 gtatttcaagttatttggagcttaacgccgggatatcaccagtacaaatttattgtggac 786
Query: 88 ggtaagtggcggcacgatgagcagcagccatttgtaaatgagatctttggggtagtgaat 147
||| |||||||||| ||||| ||| ||||||||||||||| || || ||| | |||||
Sbjct: 787 ggtgagtggcggcatgatgaacagaagccatttgtaaatgggaactatggaccaatgaat 846
Query: 148 tctatttacttactgcgacaaccagatattttgtctacccttttaagtgctgaaacacct 207
||||||||||| | || ||||| ||| ||| ||||| | | ||||||||||| |||
Sbjct: 847 actatttacttagcgagagaaccaaatactttacctaccatctcgagtgctgaaacgcct 906
Query: 208 ggtggaggccacatggaggttgacaatagtgcttctgggcctgtggaagctaatccaatg 267
||| || | ||||||| ||||| ||| || | ||||| ||||| | ||||||||| |
Sbjct: 907 ggtagatccaacatggatgttgataatgatgtctttgggcatgtgggaactaatccaagg 966
Query: 268 atgtcagagtctgatctgctaatctctcgccaccgtatatctacattcctgtctagaagt 327
||| | |||||||||| ||||||||||||||||||||| |||| |||||| | |
Sbjct: 967 atgctggggtctgatctggaggtctctcgccaccgtatatctatattcttgtctacacat 1026
Query: 328 actgcttatgatttgcttcctgagtcaggaaaggttattgccttggatataaatttgtca 387
|| || |||||||||||| |||||||||||||||| ||||||||||||||||||| ||
Sbjct: 1027 acggcatatgatttgctttctgagtcaggaaaggtcgttgccttggatataaatttacca 1086
Query: 388 gttaagcaagcactcagtattcttcatgaagagggaatatatttggctcctatatgtgat 447
|||||||||||| || | | | || ||| |||| | | | |||||||| |||| |||
Sbjct: 1087 gttaagcaagcattccatgctttgcacgaacagggtgtgtctatggctcctctatgggat 1146
Query: 448 tctagcacatgccagtttgttggagtgcttaatgcaatggacttcattcaaatattgaaa 507
| | ||| | |||||||||||||||||| ||||||||||||||||| ||||||||||
Sbjct: 1147 tttggcaggagtaagtttgttggagtgcttagtgcaatggacttcattctaatattgaaa 1206
Query: 508 gagctggggaatcatggaacagacctgactgaagaacaacttgagacatatactatagca 567
|||||||||||||||||| || | |||||||||||||||||||||| | ||||||||
Sbjct: 1207 gagctggggaatcatggatcaaaattgactgaagaacaacttgagactcacactatagct 1266
Query: 568 gattggagagaggggaaattactgcaa 594
| |||| |||||| ||||||| ||||
Sbjct: 1267 gcctggaaagagggtaaattacagcaa 1293