Miyakogusa Predicted Gene

Lj0g3v0307519.1

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0307519.1 Non Chatacterized Hit- tr|K4ALI6|K4ALI6_SETIT
Uncharacterized protein OS=Setaria italica
GN=Si039767,51.76,1e-18,DUF2348,Uncharacterised protein family
UPF0405; SUBFAMILY NOT NAMED,NULL; FAMILY NOT NAMED,NULL,CUFF.20747.1
         (270 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC58243 similar to UniRef100_A7Q403 Cluster: Chromosome...   420   e-117
gnl|LJGI|GO036695 similar to UniRef100_A7Q403 Cluster: Chromosom...   236   6e-62

>gnl|LJGI|TC58243 similar to UniRef100_A7Q403 Cluster: Chromosome chr13 scaffold_48,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr13 scaffold_48, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (64%)
          Length = 980

 Score =  420 bits (212), Expect = e-117
 Identities = 251/264 (95%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgaaatttgccagtacaatgatagatgatatatgttttcttgagtttgctgctaatggc 60
           ||||||||||||||||  |||||||||||||||| |||||||||| ||||||||||||||
Sbjct: 479 atgaaatttgccagtatcatgatagatgatatatcttttcttgaggttgctgctaatggc 538

                                                                       
Query: 61  tcttcaaatgatgttttagacttccttcattattgccagacgctaacatcagaatatggt 120
           |||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||
Sbjct: 539 tcttcaaatgatgttttagacttcctgcattattgccacacgctaacatcagaatatggt 598

                                                                       
Query: 121 tgcacatttattgcacttgaccataaggatatttatttgaatggagagaggcctgccatt 180
           ||| |||||||||||||||||||||||||||||||| |||||| ||||||||||||||||
Sbjct: 599 tgcgcatttattgcacttgaccataaggatatttatctgaatgaagagaggcctgccatt 658

                                                                       
Query: 181 atcttagagatagagtaccttgctgacattttggtcaaggctgaaccattggccactggt 240
           ||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 659 atcttagagatggagtaccttgctgacgttttggtcaaggctgaaccattggccactggt 718

                                   
Query: 241 ttggcaaaagatatgcattggcag 264
           |||||||||||| ||||| |||||
Sbjct: 719 ttggcaaaagatgtgcatgggcag 742


>gnl|LJGI|GO036695 similar to UniRef100_A7Q403 Cluster: Chromosome chr13 scaffold_48,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr13 scaffold_48, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (34%)
          Length = 659

 Score =  236 bits (119), Expect = 6e-62
 Identities = 140/147 (95%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgaaatttgccagtacaatgatagatgatatatgttttcttgagtttgctgctaatggc 60
           ||||||||||||||||  |||||||||||||||| |||||||||| ||||||||||||||
Sbjct: 510 atgaaatttgccagtatcatgatagatgatatatcttttcttgaggttgctgctaatggc 569

                                                                       
Query: 61  tcttcaaatgatgttttagacttccttcattattgccagacgctaacatcagaatatggt 120
           |||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||
Sbjct: 570 tcttcaaatgatgttttagacttcctgcattattgccacacgctaacatcagaatatggt 629

                                      
Query: 121 tgcacatttattgcacttgaccataag 147
           ||| |||||||||||||||||||||||
Sbjct: 630 tgcgcatttattgcacttgaccataag 656