Miyakogusa Predicted Gene
- Lj0g3v0307359.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0307359.1 Non Chatacterized Hit- tr|I1L482|I1L482_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.25536 PE,77.71,0,MATE
EFFLUX FAMILY PROTEIN,NULL; MULTIDRUG RESISTANCE PROTEIN,NULL;
MatE,Multi antimicrobial extrusi,CUFF.20734.1
(933 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC69358 similar to UniRef100_A7PH11 Cluster: Chromosome... 396 e-110
gnl|LJGI|GO013204 similar to UniRef100_A7PH11 Cluster: Chromosom... 274 9e-73
gnl|LJGI|BP059180 similar to UniRef100_A7PH11 Cluster: Chromosom... 109 3e-23
>gnl|LJGI|TC69358 similar to UniRef100_A7PH11 Cluster: Chromosome chr17 scaffold_16,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr17 scaffold_16, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (30%)
Length = 795
Score = 396 bits (200), Expect = e-110
Identities = 398/464 (85%)
Strand = Plus / Plus
Query: 59 caacagaaagaacagaagtaattgaagaagtgaggaagctgttatggctttcgggtcctt 118
||||||||||||| ||| | |||||||||||| ||||| | |||||||||| |||||||
Sbjct: 330 caacagaaagaactgaaattcttgaagaagtgaagaagcagctatggctttctggtcctt 389
Query: 119 tgatatctgtgagcctcctaaacttttgcctacaagtcatttctgtcatgtttgttggac 178
||||||| || | || || || || ||||| | | || ||||||||||||||||| |
Sbjct: 390 tgatatcagtcactctgctgaatttctgcctcaaccttatctctgtcatgtttgttggtc 449
Query: 179 atatgggcgagttagctctctcaggtgcttctatggccacttcttttgcaactgtcacag 238
|| | |||||||| |||||||| |||||||| ||||| |||||||||||| ||||||| |
Sbjct: 450 atcttggcgagttggctctctctggtgcttccatggctacttcttttgcatctgtcacgg 509
Query: 239 gtttcaatttattgtcaggattggcaagtgccttagataccttatgtggccagtcatatg 298
|||||| ||||||| |||| |||||||||||||||||||||||||||| || |||||||
Sbjct: 510 gtttcagtttattggtaggaatggcaagtgccttagataccttatgtggtcaatcatatg 569
Query: 299 gagcaaagcagtatcagaatttaggcatatacatgcagagggccatggtcgttcttacag 358
| ||||||||||| | |||||||| ||||||||||||| ||| | |||||| |
Sbjct: 570 gggcaaagcagtaccgcttgttaggcattcacatgcagagggctatgttgattcttatgg 629
Query: 359 ttgtaagcattccagtagcagttatttgggcaaatacaagattcattcttgttttccttg 418
|||| |||||||| | || ||||||||||||| ||| ||| ||| || |||||||||
Sbjct: 630 ttgtcagcattccgcttgcgattatttgggcaaacacaggatccatcctcattttccttg 689
Query: 419 gccaagatcctgagatatctgcagcagctggggaatatgctaagttaatggttccaagcc 478
|||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||
Sbjct: 690 gccaagatcctgagatatctgcagcagctggggaatatgctaagataatggttccatgcc 749
Query: 479 tttttggttatggtcttctgcaatgcctcaatagattcttacaa 522
||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 750 tttttggttatggtcttctgcaatgcctcaatagattcttacaa 793
>gnl|LJGI|GO013204 similar to UniRef100_A7PH11 Cluster: Chromosome chr17 scaffold_16,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr17 scaffold_16, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (35%)
Length = 528
Score = 274 bits (138), Expect = 9e-73
Identities = 344/410 (83%), Gaps = 2/410 (0%)
Strand = Plus / Plus
Query: 202 ggtgcttctatggccacttcttttgcaactgtcacaggtttcaatttattgtcaggattg 261
|||||||| ||||||||||||||||| ||||||| ||| | | || ||| ||| ||
Sbjct: 111 ggtgcttcaatggccacttcttttgcttctgtcactggtattagcttgttgctgggaatg 170
Query: 262 gcaagtgccttagataccttatgtggccagtcatatggagcaaagcagtatcagaat-tt 320
|| |||||||| |||||||| ||||| ||||||||||||||||||||| | |||||| ||
Sbjct: 171 gccagtgccttggataccttttgtgggcagtcatatggagcaaagcagca-cagaatgtt 229
Query: 321 aggcatatacatgcagagggccatggtcgttcttacagttgtaagcattccagtagcagt 380
||||||| ||||||| ||||||||| || |||| |||| ||||| || ||||| |
Sbjct: 230 aggcatacacatgcaaagggccatgctcactcttgtgattgtcagcatacccttagcaat 289
Query: 381 tatttgggcaaatacaagattcattcttgttttccttggccaagatcctgagatatctgc 440
||||||||||| ||||| | |||||| |||||| |||||||||||||||| ||||||||
Sbjct: 290 catttgggcaaacacaaggtccattctggttttctttggccaagatcctgaaatatctgc 349
Query: 441 agcagctggggaatatgctaagttaatggttccaagcctttttggttatggtcttctgca 500
|| ||| ||| |||||||| |||||||||||||||||||||||| ||||||||||| ||
Sbjct: 350 agaagcagggaaatatgctcagttaatggttccaagcctttttgcctatggtcttcttca 409
Query: 501 atgcctcaatagattcttacaaacccaaaatattgtatttccaatgatgttcagctcagg 560
||| || || |||||||||||||| |||||||||||||| |||| ||||||||||| ||
Sbjct: 410 atgtctaaacagattcttacaaacacaaaatattgtattgccaactatgttcagctctgg 469
Query: 561 agtaacaacttttctacacttctttatatgttggattatggtattcaaat 610
||| || ||||| ||||| | || | ||||||||| ||||||||||||
Sbjct: 470 agttactactttgctacatcttgttgtgtgttggattttggtattcaaat 519
>gnl|LJGI|BP059180 similar to UniRef100_A7PH11 Cluster: Chromosome chr17 scaffold_16,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr17 scaffold_16, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (7%)
Length = 133
Score = 109 bits (55), Expect = 3e-23
Identities = 109/127 (85%)
Strand = Plus / Plus
Query: 54 aagggcaacagaaagaacagaagtaattgaagaagtgaggaagctgttatggctttcggg 113
|||||||||||||||||||||||| |||||||||||||||||| ||||||||| | ||
Sbjct: 6 aagggcaacagaaagaacagaagttcttgaagaagtgaggaagcagttatggctggcagg 65
Query: 114 tcctttgatatctgtgagcctcctaaacttttgcctacaagtcatttctgtcatgtttgt 173
||||| || | ||||| ||||||||| |||||| || | | || ||||||||||||||
Sbjct: 66 acctttaatttgtgtgaacctcctaaatttttgcataaatattatatctgtcatgtttgt 125
Query: 174 tggacat 180
|||||||
Sbjct: 126 tggacat 132