Miyakogusa Predicted Gene

Lj0g3v0307159.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0307159.1 Non Chatacterized Hit- tr|B9TC41|B9TC41_RICCO
Putative uncharacterized protein (Fragment)
OS=Ricinus,84.48,6e-19,seg,NULL; DUF1218,Protein of unknown function
DUF1218,CUFF.20714.1
         (483 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC76746 similar to UniRef100_A7PXL7 Cluster: Chromosome...   246   1e-64

>gnl|LJGI|TC76746 similar to UniRef100_A7PXL7 Cluster: Chromosome chr12 scaffold_36,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr12 scaffold_36, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (80%)
          Length = 637

 Score =  246 bits (124), Expect = 1e-64
 Identities = 339/410 (82%), Gaps = 3/410 (0%)
 Strand = Plus / Plus

                                                                       
Query: 77  aagctgaaattgcacaaaacaaggttaagcacctgagattgtggatatttgagtgtagag 136
           |||||||||| |||||||||||||| |||||  | ||| |||||||||||||||||||||
Sbjct: 16  aagctgaaatagcacaaaacaaggtcaagcatttaagactgtggatatttgagtgtagag 75

                                                                       
Query: 137 aaccaagtcataatgcttttatgcttgggttaggtgcagcagtgcttttggctctagccc 196
           ||||||||||| | || || ||||| || || ||||||||||||||||| |  |||||||
Sbjct: 76  aaccaagtcatcaagccttcatgctgggtttgggtgcagcagtgcttttaggactagccc 135

                                                                       
Query: 197 atgttatactcaatctgataggtggctgcaattgcctctgttctcaa---gagcttcaaa 253
           ||| |||   |||| || |||||||||||| |||| | |||||||||   ||| || | |
Sbjct: 136 atgctattgccaatttgctaggtggctgcagttgcatttgttctcaacaagagtttgaga 195

                                                                       
Query: 254 aagcttctcccaacagacaactctcaatggcttgcctcattttaacttggattgtgttgg 313
           ||||| | ||||  || ||||||||| |||||||||| |||||||||||| |  ||||||
Sbjct: 196 aagctgcccccagtaggcaactctcagtggcttgccttattttaacttgggtcctgttgg 255

                                                                       
Query: 314 ctgttggattgagcatgctggtgatagggacttcatcaaaccacaagtcaagaggttcat 373
           | |||||||||  |||||| ||||||||| |||  |||||| |||  |||   ||||| |
Sbjct: 256 ccgttggattgtccatgctagtgataggggctttgtcaaacaacagatcagacggttcct 315

                                                                       
Query: 374 gtggcttcacacaccatcacttcctctccattggagggattctgtgttttgttcatggcc 433
           |||| ||  |||||||||||||||| |||||||| ||||||   ||||||||||||||||
Sbjct: 316 gtggtttatcacaccatcacttcctgtccattggtgggatttcatgttttgttcatggcc 375

                                                             
Query: 434 tgttctctgttgcttattacgcttctgccactgcctcgattaattagtga 483
           | |||| |||||| ||||||| |||||||||| |||| ||  ||||||||
Sbjct: 376 tattctgtgttgcatattacgtttctgccacttcctccatggattagtga 425