Miyakogusa Predicted Gene

Lj0g3v0307049.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0307049.1 tr|Q9SGX9|Q9SGX9_ARATH F20B24.14 OS=Arabidopsis
thaliana PE=4 SV=1,30.3,0.000000003,seg,NULL,CUFF.20701.1
         (903 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|BW613675 similar to UniRef100_A7QY03 Cluster: Chromosom...   442   e-123

>gnl|LJGI|BW613675 similar to UniRef100_A7QY03 Cluster: Chromosome undetermined
           scaffold_235, whole genome shotgun sequence; n=1; Vitis
           vinifera|Rep: Chromosome undetermined scaffold_235,
           whole genome shotgun sequence - Vitis vinifera (Grape),
           partial (21%)
          Length = 478

 Score =  442 bits (223), Expect = e-123
 Identities = 223/223 (100%)
 Strand = Plus / Plus

                                                                       
Query: 230 acaccatcctcaccgtctccttcaactccaaacacctcgaagaacactacgtttcgaagc 289
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 256 acaccatcctcaccgtctccttcaactccaaacacctcgaagaacactacgtttcgaagc 315

                                                                       
Query: 290 tgctattttcatggccacaggtatcgtgcgtcccagagcttcctgcacggggcatcagaa 349
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 316 tgctattttcatggccacaggtatcgtgcgtcccagagcttcctgcacggggcatcagaa 375

                                                                       
Query: 350 ctgtgctagtgagctaccgagattccgccggcgagattcagaagttcgctctgcggtttc 409
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 376 ctgtgctagtgagctaccgagattccgccggcgagattcagaagttcgctctgcggtttc 435

                                                      
Query: 410 catcaatatatgaaacacagtcatttatcaatgctttgaagga 452
           |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 436 catcaatatatgaaacacagtcatttatcaatgctttgaagga 478



 Score =  127 bits (64), Expect = 1e-28
 Identities = 64/64 (100%)
 Strand = Plus / Plus

                                                                      
Query: 1  atggcgggaaccctagctctggtttctatgagggatcagtgggagatttccttcgcacgc 60
          ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 27 atggcgggaaccctagctctggtttctatgagggatcagtgggagatttccttcgcacgc 86

              
Query: 61 ttca 64
          ||||
Sbjct: 87 ttca 90